RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZNF76P36508 570 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 LIFRP42702 1097 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 KCNC3Q14003 757 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 ODR4Q5SWX8 454 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 SYCE2Q6PIF2 218 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 ABHD15Q6UXT9 468 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 CKAP2LQ8IYA6 745 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 METTL13Q8N6R0 699 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 MRPS27Q92552 414 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 ZNF302Q9NR11 478 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 TMEM161AQ9NX61 479 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 PUF60Q9UHX1 559 aaKnown RBP15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 COL1A2P08123 1366 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 PLXNA3P51805 1871 aa15.94■□□□□ 0.14
SMARCA4-206ENST00000538456 SPTBN4Q9H254 2564 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 H0Y858 1186 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 MEIS1O00470 390 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 ZNF484Q5JVG2 852 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 SWSAP1Q6NVH7 229 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 TMEM184AQ6ZMB5 413 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 LZTS1Q9Y250 596 aa15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 PTPRZ1P23471 2315 aaPredicted RBP15.93■□□□□ 0.14
SMARCA4-206ENST00000538456 WDR81Q562E7 1941 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 VPS13AQ96RL7 3174 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 SLC27A2O14975 620 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 C22orf31O95567 290 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 FOSP01100 380 aaPredicted RBP15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 ATP4AP20648 1035 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 SREBF1P36956 1147 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 PLCB3Q01970 1234 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 PPP1R18Q6NYC8 613 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 MIS18BP1Q6P0N0 1132 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 KCNT2Q6UVM3 1135 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 LRRC55Q6ZSA7 311 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 TMC7Q7Z402 723 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 ABI1Q8IZP0 508 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 RNF169Q8NCN4 708 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 KREMEN2Q8NCW0 462 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 RASGRP4Q8TDF6 673 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 YTHDC1Q96MU7 727 aaKnown RBP15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 ZNF558Q96NG5 402 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 TMEM117Q9H0C3 514 aa15.92■□□□□ 0.14
SMARCA4-206ENST00000538456 DMDP11532 3685 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 SMCO2A6NFE2 343 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM86B1E9PN63 330 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 GPR32O75388 356 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM86B2P0C5J1 330 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 CA8P35219 290 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 CLCN3P51790 818 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM189BP81408 668 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 KRT17Q04695 432 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 DSC3Q14574 896 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 SYNE3Q6ZMZ3 975 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 FAM43BQ6ZT52 329 aaPredicted RBP15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 PLA2G4DQ86XP0 818 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 LRRC43Q8N309 656 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 RIPOR3Q96MK2 946 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 CASD1Q96PB1 797 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 LSG1Q9H089 658 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 NGRNQ9NPE2 291 aaKnown RBP15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 RNF19AQ9NV58 838 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 NR2E1Q9Y466 385 aa15.91■□□□□ 0.14
SMARCA4-206ENST00000538456 IPO5O00410 1097 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 WEE2P0C1S8 567 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 HOXB8P17481 243 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 PPM1AP35813 382 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 AP3B2Q13367 1082 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 MTMR3Q13615 1198 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 JAKMIP3Q5VZ66 844 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 CREB3L3Q68CJ9 461 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 APOA5Q6Q788 366 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 NIPA1Q7RTP0 329 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 SGMS1Q86VZ5 419 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 BBXQ8WY36 941 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 ZNF668Q96K58 619 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 IRF2BPLQ9H1B7 796 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 SMOC2Q9H3U7 446 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 POMKQ9H5K3 350 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 TCEAL9Q9UHQ7 104 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 HCFC2Q9Y5Z7 792 aa15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 V9GY48 417 aaPredicted RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 RIF1Q5UIP0 2472 aaKnown RBP15.9■□□□□ 0.14
SMARCA4-206ENST00000538456 C2CD4DB7Z1M9 353 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 DHX15O43143 795 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 HOXA2O43364 376 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 BRD1O95696 1058 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 CLK2P49760 499 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 NLRP11P59045 1033 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 SMC1AQ14683 1233 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 RTN1Q16799 776 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 CLLU1OSQ5K130 101 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 CES5AQ6NT32 575 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 CASP10Q92851 521 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 TCEANC2Q96MN5 208 aa15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 RBM28Q9NW13 759 aaKnown RBP15.89■□□□□ 0.13
SMARCA4-206ENST00000538456 BARHL2Q9NY43 387 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms