RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 ADAMTS10Q9H324 1103 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 TFIP11Q9UBB9 837 aaKnown RBP19.99■□□□□ 0.79
DDX55-204ENST00000536079 TRPV2Q9Y5S1 764 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 SIP14410 1827 aa19.99■□□□□ 0.79
DDX55-204ENST00000536079 A0A1W2PPC1 479 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 GRXCR1A8MXD5 290 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 BRD1O95696 1058 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 RARRES1P49788 294 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 KIZQ2M2Z5 673 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 PLEKHG4Q58EX7 1191 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 FBXO47Q5MNV8 452 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 KCNK18Q7Z418 384 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 RSPH3Q86UC2 560 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 SNX29Q8TEQ0 813 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 TMEM143Q96AN5 459 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 PNMA5Q96PV4 448 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 DHX33Q9H6R0 707 aaKnown RBP19.98■□□□□ 0.79
DDX55-204ENST00000536079 XPNPEP1Q9NQW7 623 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 ANKEF1Q9NU02 776 aa19.98■□□□□ 0.79
DDX55-204ENST00000536079 FBXO2Q9UK22 296 aaPredicted RBP19.98■□□□□ 0.79
DDX55-204ENST00000536079 PFKMP08237 780 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 SPECC1Q5M775 1068 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 IER5Q5VY09 327 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 OTUD6AQ7L8S5 288 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 KSR1Q8IVT5 923 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 ERMNQ8TAM6 284 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 LRRC15Q8TF66 581 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 CLIC6Q96NY7 704 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 DAXXQ9UER7 740 aaPredicted RBP19.97■□□□□ 0.79
DDX55-204ENST00000536079 KIAA1024Q9UPX6 916 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 AKT3Q9Y243 479 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 GINS2Q9Y248 185 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 EVPLQ92817 2033 aa19.97■□□□□ 0.79
DDX55-204ENST00000536079 PARNO95453 639 aaKnown RBP19.96■□□□□ 0.79
DDX55-204ENST00000536079 CNKSR3Q6P9H4 555 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 USP49Q70CQ1 688 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 TMCO2Q7Z6W1 182 aaPredicted RBP19.96■□□□□ 0.79
DDX55-204ENST00000536079 LRCH3Q96II8 777 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 PLIN2Q99541 437 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 OSMRQ99650 979 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 DDX19AQ9NUU7 478 aaKnown RBP19.96■□□□□ 0.79
DDX55-204ENST00000536079 KDM3AQ9Y4C1 1321 aa19.96■□□□□ 0.79
DDX55-204ENST00000536079 E9PMD0 336 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 BMP15O95972 392 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 CD52P31358 61 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 DDIT3P35638 169 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 NASPP49321 788 aaPredicted RBP19.95■□□□□ 0.78
DDX55-204ENST00000536079 NLRP11P59045 1033 aaKnown RBP19.95■□□□□ 0.78
DDX55-204ENST00000536079 GRB10Q13322 594 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 EMC2Q15006 297 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 SLC39A14Q15043 492 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 LRIT3Q3SXY7 679 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 HAUS3Q68CZ6 603 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.95■□□□□ 0.78
DDX55-204ENST00000536079 NACC1Q96RE7 527 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 CSRNP2Q9H175 543 aa19.95■□□□□ 0.78
DDX55-204ENST00000536079 SUCLA2Q9P2R7 463 aaPredicted RBP19.95■□□□□ 0.78
DDX55-204ENST00000536079 NOC2LQ9Y3T9 749 aaKnown RBP19.95■□□□□ 0.78
DDX55-204ENST00000536079 ZBBXA8MT70 800 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 CSDE1O75534 798 aaKnown RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 XRCC6P12956 609 aaKnown RBP eCLIP19.94■□□□□ 0.788e-8■■■□□ 14.6
DDX55-204ENST00000536079 TMOD1P28289 359 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 RFC5P40937 340 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 FXR1P51114 621 aaKnown RBP eCLIP19.94■□□□□ 0.78
DDX55-204ENST00000536079 GPC3P51654 580 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 POLGP54098 1239 aaPredicted RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 DEFB103AP81534 67 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 DNM1Q05193 864 aaKnown RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 ZRSR1Q15695 479 aaKnown RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 KRT79Q5XKE5 535 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 TSHZ1Q6ZSZ6 1077 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 LINC00301Q8NCQ3 95 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 IFIH1Q9BYX4 1025 aaKnown RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 RAB34Q9BZG1 259 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 TMX1Q9H3N1 280 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 POLD4Q9HCU8 107 aa19.94■□□□□ 0.78
DDX55-204ENST00000536079 DBR1Q9UK59 544 aaKnown RBP19.94■□□□□ 0.78
DDX55-204ENST00000536079 M0QZ92 97 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 USO1O60763 962 aaKnown RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 RPLP2P05387 115 aaKnown RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 FGFR4P22455 802 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 CRYBB1P53674 252 aaPredicted RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 WDR5P61964 334 aaKnown RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 HYIQ5T013 277 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 RTN4RL1Q86UN2 441 aaPredicted RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 CABP7Q86V35 215 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 PRPF31Q8WWY3 499 aaKnown RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 LINC01599Q8WXQ3 324 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 SLC7A3Q8WY07 619 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 SEPT8Q92599 483 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 EPSTI1Q96J88 318 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 ERVK-5Q9HDB9 667 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 GPRC5CQ9NQ84 441 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 PADI3Q9ULW8 664 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 PPME1Q9Y570 386 aa19.93■□□□□ 0.78
DDX55-204ENST00000536079 SRPRBQ9Y5M8 271 aaKnown RBP19.93■□□□□ 0.78
DDX55-204ENST00000536079 ARID2Q68CP9 1835 aa19.92■□□□□ 0.78
DDX55-204ENST00000536079 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.92■□□□□ 0.78
DDX55-204ENST00000536079 PDIA4P13667 645 aaKnown RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms