RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 POTEIP0CG38 1075 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 SPATA31C1P0DKV0 1188 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 STAT3P40763 770 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 CC2D2BQ6DHV5 1058 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 POTEGQ6S5H5 508 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 POTEEQ6S8J3 1075 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 CCDC121Q6ZUS5 278 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 TATDN2Q93075 761 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 LENG9Q96B70 501 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 KIF9Q9HAQ2 790 aa19.56■□□□□ 0.72
RAB40C-203ENST00000535977 HERC5Q9UII4 1024 aaKnown RBP19.56■□□□□ 0.72
RAB40C-203ENST00000535977 NPHP3-ACAD11A0A0J9YXS1 232 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 ANKRD33BA6NCL7 494 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 FAM196BA6NMK8 535 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 BMT2Q1RMZ1 405 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 CCDC181Q5TID7 509 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 EPM2AIP1Q7L775 607 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-203ENST00000535977 SUPT20HQ8NEM7 779 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 CNKSR1Q969H4 720 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 ZHX3Q9H4I2 956 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 ACTR5Q9H9F9 607 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-203ENST00000535977 NLRC4Q9NPP4 1024 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 GGA2Q9UJY4 613 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 GAP43P17677 238 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 NR2F2P24468 414 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 SLC7A5Q01650 507 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 GFPT1Q06210 699 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-203ENST00000535977 KCNH2Q12809 1159 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 SLC18A3Q16572 532 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 FGFBP2Q9BYJ0 223 aa19.55■□□□□ 0.72
RAB40C-203ENST00000535977 ARMCX3Q9UH62 379 aaPredicted RBP19.55■□□□□ 0.72
RAB40C-203ENST00000535977 EYA4O95677 639 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 ANXA13P27216 316 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 ZNF76P36508 570 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 RASSF7Q02833 373 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 ADCY2Q08462 1091 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 GLE1Q53GS7 698 aaKnown RBP19.54■□□□□ 0.72
RAB40C-203ENST00000535977 AP1ARQ63HQ0 302 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 SPATS2LQ9NUQ6 558 aaKnown RBP19.54■□□□□ 0.72
RAB40C-203ENST00000535977 DNM1LO00429 736 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 SLC16A3O15427 465 aaKnown RBP19.54■□□□□ 0.72
RAB40C-203ENST00000535977 MUTP22033 750 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 EPHB4P54760 987 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 SLC8A3P57103 927 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 SPATA4Q8NEY3 305 aa19.54■□□□□ 0.72
RAB40C-203ENST00000535977 BTNL10A8MVZ5 291 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 FAM86B1E9PN63 330 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 OPLAHO14841 1288 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 MSH4O15457 936 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 FAM107AO95990 144 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 FAM86B2P0C5J1 330 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 SLURP2P0DP57 97 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 NAB2Q15742 525 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 ASIC2Q16515 512 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 USH1GQ495M9 461 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 ACCSLQ4AC99 568 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 TUFT1Q9NNX1 390 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 TYW1Q9NV66 732 aaKnown RBP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 HDAC9Q9UKV0 1011 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 TLR2O60603 784 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 GDF11O95390 407 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 GH2P01242 217 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 AFPP02771 609 aaKnown RBP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 SLC8A1P32418 973 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 BAG6P46379 1132 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 KLHL30Q0D2K2 578 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 PABPC4Q13310 644 aaKnown RBP eCLIP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 SH3GL3Q99963 347 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 REEP2Q9BRK0 252 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 GANQ9H2C0 597 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 EHMT1Q9H9B1 1298 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 FBXL5Q9UKA1 691 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 PCDHAC2Q9Y5I4 1007 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 E7EVH7 732 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 TBCAO75347 108 aaKnown RBP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 EMBQ6PCB8 327 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.53■□□□□ 0.727e-7■■■□□ 16.7
RAB40C-203ENST00000535977 MAB21L3Q8N8X9 362 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 SPDL1Q96EA4 605 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 P2RX7Q99572 595 aaKnown RBP19.53■□□□□ 0.72
RAB40C-203ENST00000535977 OSBPL7Q9BZF2 842 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 VAV3Q9UKW4 847 aa19.53■□□□□ 0.72
RAB40C-203ENST00000535977 NR1D1P20393 614 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 CFAP221Q4G0U5 840 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 SFR1Q86XK3 245 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 TDRD3Q9H7E2 651 aaKnown RBP19.52■□□□□ 0.72
RAB40C-203ENST00000535977 OLFML3Q9NRN5 406 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 ETAA1Q9NY74 926 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 TMOD2Q9NZR1 351 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 PRR12Q9ULL5 1215 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 RABGAP1Q9Y3P9 1069 aa19.52■□□□□ 0.72
RAB40C-203ENST00000535977 ATP8B3O60423 1300 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 PEX19P40855 299 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 MDH1P40925 334 aaKnown RBP19.52■□□□□ 0.71
RAB40C-203ENST00000535977 STAT2P52630 851 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 PSMC6P62333 389 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 RAPGEF1Q13905 1077 aa19.52■□□□□ 0.71
RAB40C-203ENST00000535977 SHROOM1Q2M3G4 852 aaPredicted RBP19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms