RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 WDR78Q5VTH9 848 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 ALKBH5Q6P6C2 394 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 FAM160B2Q86V87 743 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 BACH1O14867 736 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 HARSP12081 509 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 KCNA3P22001 575 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 BAATQ14032 418 aaPredicted RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 FIGNQ5HY92 759 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 CRYGNQ8WXF5 182 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 GMLQ99445 158 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 MXRA8Q9BRK3 442 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 AP1M1Q9BXS5 423 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 EIF3JO75822 258 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 PSMC2P35998 433 aaKnown RBP17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 USP14P54578 494 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 PHLDB2Q86SQ0 1253 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 PICK1Q9NRD5 415 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 FAM184BQ9ULE4 1060 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 RIPK3Q9Y572 518 aa17.4■□□□□ 0.38
ATP2C1-224ENST00000533801 ATRNL1Q5VV63 1379 aa17.39■□□□□ 0.38
ATP2C1-224ENST00000533801 VCAM1P19320 739 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 HLTFQ14527 1009 aaKnown RBP eCLIP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 R3HDM1Q15032 1099 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 RNF207Q6ZRF8 634 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 KRT12Q99456 494 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 RBM12Q9NTZ6 932 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 RGS17Q9UGC6 210 aaPredicted RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 PDXKO00764 312 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 KRT13P13646 458 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 CIITAP33076 1130 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 SEMA3FQ13275 785 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 CBWD6Q4V339 395 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 CBWD3Q5JTY5 395 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 CBWD5Q5RIA9 395 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 ANGEL2Q5VTE6 544 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 KLHDC7AQ5VTJ3 777 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 MOXD1Q6UVY6 613 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 C1orf186Q6ZWK4 172 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 SLC35C1Q96A29 364 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 BICD1Q96G01 975 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 POLR3CQ9BUI4 534 aaPredicted RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 TRIM31Q9BZY9 425 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 ACP6Q9NPH0 428 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 DLG4P78352 724 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 TRAF1Q13077 416 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 SNRNP48Q6IEG0 339 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 IQCEQ6IPM2 695 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 SPATA4Q8NEY3 305 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 RBM46Q8TBY0 533 aaKnown RBP17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 DNAJC12Q9UKB3 198 aa17.39■□□□□ 0.37
ATP2C1-224ENST00000533801 ZBED4O75132 1171 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 DLATP10515 647 aaKnown RBP17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 UGCGQ16739 394 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 EDRF1Q3B7T1 1238 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 VPS36Q86VN1 386 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 MBOAT7Q96N66 472 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 RNF146Q9NTX7 359 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 TELO2Q9Y4R8 837 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 GABPB1Q06547 395 aaPredicted RBP17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 ITGB3BPQ13352 177 aaPredicted RBP17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 SLC18A3Q16572 532 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 PAPD7Q5XG87 772 aaKnown RBP17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 GOLGA6L1Q8N7Z2 621 aa17.38■□□□□ 0.37
ATP2C1-224ENST00000533801 ICAM1P05362 532 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 DRAP1Q14919 205 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 LMBRD2Q68DH5 695 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 TTC19Q6DKK2 380 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 DAAM2Q86T65 1068 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 TUBB2AQ13885 445 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 STXBP4Q6ZWJ1 553 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 SLC5A5Q92911 643 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 PSMD1Q99460 953 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 TUBB2BQ9BVA1 445 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 AGPAT3Q9NRZ7 376 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 STAT1P42224 750 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 MYL7Q01449 175 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 GUCY2DQ02846 1103 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 COBLL1Q53SF7 1204 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 SYTL5Q8TDW5 730 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 POP1Q99575 1024 aaKnown RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 TLR10Q9BXR5 811 aa17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 UBE2TQ9NPD8 197 aaPredicted RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 LARSQ9P2J5 1176 aaKnown RBP17.37■□□□□ 0.37
ATP2C1-224ENST00000533801 CALCAP01258 141 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 EPHA7Q15375 998 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 MCTP2Q6DN12 878 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 ZNF720Q7Z2F6 126 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 FRMD5Q7Z6J6 570 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 CREG2Q8IUH2 290 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 PPM1KQ8N3J5 372 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 ZNF668Q96K58 619 aaPredicted RBP17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 GANQ9H2C0 597 aa17.36■□□□□ 0.37
ATP2C1-224ENST00000533801 GAP43P17677 238 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms