RNA–Protein interactions for RNA: ENST00000531660.5

NR1H3-233, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 3

Gene NR1H3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-233	ENST00000531660	SUGCT	Q9HAC7	445 aa		18.91	■□□□□ 0.62
NR1H3-233	ENST00000531660	PADI3	Q9ULW8	664 aa		18.91	■□□□□ 0.62
NR1H3-233	ENST00000531660	AKT3	Q9Y243	479 aa		18.91	■□□□□ 0.62
NR1H3-233	ENST00000531660	TRANK1	O15050	2925 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	ENPP3	O14638	875 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	GPR182	O15218	404 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	GPR32	O75388	356 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	MAF	O75444	373 aa	Predicted RBP	18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	RPS6KA5	O75582	802 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	LYPLA2	O95372	231 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	VTN	P04004	478 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	TAP1	Q03518	808 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	CUL4A	Q13619	759 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	LRRC71	Q8N4P6	559 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	DYDC2	Q96IM9	177 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	GAS2L1	Q99501	681 aa	Predicted RBP	18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	HSD17B14	Q9BPX1	270 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	TMEM60	Q9H2L4	133 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	CYP26B1	Q9NR63	512 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	RGL1	Q9NZL6	768 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	GINS2	Q9Y248	185 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660	CDH23	Q9H251	3354 aa		18.9	■□□□□ 0.62
NR1H3-233	ENST00000531660		H3BQV1	296 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	SLITRK3	O94933	977 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	OR52Z1	P0C646	297 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	FOSL2	P15408	326 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	RFC5	P40937	340 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	ZNF174	Q15697	407 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	KIZ	Q2M2Z5	673 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	TMCO2	Q7Z6W1	182 aa	Predicted RBP	18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	ADAMTS10	Q9H324	1103 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	PRDM12	Q9H4Q4	367 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	CDHR5	Q9HBB8	845 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	ERVK-5	Q9HDB9	667 aa		18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	WRAP73	Q9P2S5	460 aa	Predicted RBP	18.89	■□□□□ 0.61
NR1H3-233	ENST00000531660	YWHAB	P31946	246 aa	Known RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	NLRP11	P59045	1033 aa	Known RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	CTTN	Q14247	550 aa	Known RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	FAM117B	Q6P1L5	589 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	TPH2	Q8IWU9	490 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	SP7	Q8TDD2	431 aa	Predicted RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	TMEM40	Q8WWA1	233 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	SLC7A3	Q8WY07	619 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	CEP170P1	Q96L14	293 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	OSMR	Q99650	979 aa		18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	RNF216	Q9NWF9	866 aa	Predicted RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	NOC2L	Q9Y3T9	749 aa	Known RBP	18.88	■□□□□ 0.61
NR1H3-233	ENST00000531660	TMEM150B	A6NC51	233 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	LAD1	O00515	517 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	GAS2	O43903	313 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	XRCC6	P12956	609 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	EIF4B	P23588	611 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	GPC3	P51654	580 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	CYP4A11	Q02928	519 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	NFX1	Q12986	1120 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	COL4A6	Q14031	1691 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	RILPL1	Q5EBL4	403 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	LARP1B	Q659C4	914 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	PLA2G4F	Q68DD2	849 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	MCTP1	Q6DN14	999 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	YME1L1	Q96TA2	773 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	DHX33	Q9H6R0	707 aa	Known RBP	18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	ANKEF1	Q9NU02	776 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	ST3GAL5	Q9UNP4	418 aa		18.87	■□□□□ 0.61
NR1H3-233	ENST00000531660	LCHN	A4D1U4	455 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	UPP2	O95045	317 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	TOB1	P50616	345 aa	Predicted RBP	18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	NPEPPS	P55786	919 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	TMEM266	Q2M3C6	531 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	RTN4RL1	Q86UN2	441 aa	Predicted RBP	18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	ZNF410	Q86VK4	478 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	C4orf32	Q8N8J7	132 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	ERMN	Q8TAM6	284 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	LINC01599	Q8WXQ3	324 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	SAMD11	Q96NU1	681 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	TGS1	Q96RS0	853 aa	Known RBP	18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	SH2D3A	Q9BRG2	576 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	TMX1	Q9H3N1	280 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	TUFT1	Q9NNX1	390 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	C1orf112	Q9NSG2	853 aa		18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.86	■□□□□ 0.61
NR1H3-233	ENST00000531660	LINC01553	A4QN01	128 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	POTEM	A6NI47	508 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	ARHGEF15	O94989	841 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	STAG3L1	P0CL83	205 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	DARS	P14868	501 aa	Known RBP	18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	PDC	P20941	246 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	MUT	P22033	750 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	TEC	P42680	631 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	FXR2	P51116	673 aa	Known RBP eCLIP	18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	POLG	P54098	1239 aa	Predicted RBP	18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	ERVK-21	P61565	698 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	XKR9	Q5GH70	373 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	FAM228A	Q86W67	206 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	NPAS4	Q8IUM7	802 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	MAFA	Q8NHW3	353 aa	Predicted RBP	18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	TCP11	Q8WWU5	503 aa		18.85	■□□□□ 0.61
NR1H3-233	ENST00000531660	NLRP7	Q8WX94	980 aa		18.85	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms