RNA–Protein interactions for RNA: ENST00000530279.5

C11orf54-208, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 4

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-208ENST00000530279 APPBP2Q92624 585 aa4.96□□□□□ -1.62
C11orf54-208ENST00000530279 ZNF341Q9BYN7 854 aa4.96□□□□□ -1.62
C11orf54-208ENST00000530279 PDGFDQ9GZP0 370 aaPredicted RBP4.96□□□□□ -1.62
C11orf54-208ENST00000530279 IFT57Q9NWB7 429 aa4.96□□□□□ -1.62
C11orf54-208ENST00000530279 ZNF652Q9Y2D9 606 aa4.96□□□□□ -1.62
C11orf54-208ENST00000530279 UBR3Q6ZT12 1888 aa4.96□□□□□ -1.62
C11orf54-208ENST00000530279 MYH14Q7Z406 1995 aaKnown RBP4.95□□□□□ -1.62
C11orf54-208ENST00000530279 A0A1W2PQ45 241 aaPredicted RBP4.95□□□□□ -1.62
C11orf54-208ENST00000530279 A0A1W2PQY0 241 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 APAF1O14727 1248 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 CDC45O75419 566 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 SYPP08247 313 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 NCAM1P13591 858 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 TM4SF1P30408 202 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 RASA3Q14644 834 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 TTLL7Q6ZT98 887 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 SLCO6A1Q86UG4 719 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 WDR63Q8IWG1 891 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 FAM13CQ8NE31 585 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 ADAMTS17Q8TE56 1095 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 CEP89Q96ST8 783 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 BRINP2Q9C0B6 783 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 TSPYL4Q9UJ04 414 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 ZBTB1Q9Y2K1 713 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 MRPL42Q9Y6G3 142 aaKnown RBP4.95□□□□□ -1.62
C11orf54-208ENST00000530279 UBR2Q8IWV8 1755 aa4.95□□□□□ -1.62
C11orf54-208ENST00000530279 COL15A1P39059 1388 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 SIPA1L3O60292 1781 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 CCDC163A0A0D9SF12 145 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 PPFIA2O75334 1257 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 MMP10P09238 476 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 RAG1P15918 1043 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 ZNF143P52747 638 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 DCTN1Q14203 1278 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 PLEKHG4Q58EX7 1191 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 LRCH2Q5VUJ6 765 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 NLRC3Q7RTR2 1065 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 JAZF1Q86VZ6 243 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 DEF6Q9H4E7 631 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 DLL4Q9NR61 685 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 REV1Q9UBZ9 1251 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 PLA2G2DQ9UNK4 145 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 POLR3KQ9Y2Y1 108 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 USP16Q9Y5T5 823 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 COL5A3P25940 1745 aaPredicted RBP4.94□□□□□ -1.62
C11orf54-208ENST00000530279 RNF123Q5XPI4 1314 aa4.94□□□□□ -1.62
C11orf54-208ENST00000530279 A0A1W2PQH9 124 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 POLRMTO00411 1230 aaKnown RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 TNFRSF10CO14798 259 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 KCNQ3O43525 872 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 CAMTA2O94983 1202 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 A1BGP04217 495 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 NME1P15531 152 aaKnown RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 MC3RP41968 323 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 CSRP2Q16527 193 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 LONRF2Q1L5Z9 754 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 HSP90AB3PQ58FF7 597 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 ZNF585AQ6P3V2 769 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 BORAQ6PGQ7 559 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 PAQR3Q6TCH7 311 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 B3GNT8Q7Z7M8 397 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 FAM178BQ8IXR5 827 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 LRRC47Q8N1G4 583 aaKnown RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 FAM169BQ8N8A8 192 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 SH3TC2Q8TF17 1288 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 IPO9Q96P70 1041 aaKnown RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 BRIP1Q9BX63 1249 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 CNNM2Q9H8M5 875 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 CD248Q9HCU0 757 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 DDX21Q9NR30 783 aaKnown RBP eCLIP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 ST7Q9NRC1 585 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 SPATA6Q9NWH7 488 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 HYPKQ9NX55 129 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 IMPACTQ9P2X3 320 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 DBF4Q9UBU7 674 aaPredicted RBP4.93□□□□□ -1.62
C11orf54-208ENST00000530279 HCFC2Q9Y5Z7 792 aa4.93□□□□□ -1.62
C11orf54-208ENST00000530279 CARMIL3Q8ND23 1372 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 IBTKQ9P2D0 1353 aaPredicted RBP4.92□□□□□ -1.62
C11orf54-208ENST00000530279 TJP1Q07157 1748 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 C10orf71Q711Q0 1435 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 KLRG2A4D1S0 409 aaPredicted RBP4.92□□□□□ -1.62
C11orf54-208ENST00000530279 NPIPB8E9PQR5 432 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 CYBBP04839 570 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 RGS19P49795 217 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 ANAPC15P60006 121 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 KRTAP10-9P60411 292 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 IGBP1P78318 339 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 TCEA2Q15560 299 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 PARP10Q53GL7 1025 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 OVOS1Q6IE37 1185 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 VHLLQ6RSH7 139 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 C16orf86Q6ZW13 317 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 FAM124AQ86V42 546 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 CCDC146Q8IYE0 955 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 SLFN12Q8IYM2 578 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 PHACTR4Q8IZ21 702 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 ZSWIM2Q8NEG5 633 aa4.92□□□□□ -1.62
C11orf54-208ENST00000530279 ATG4CQ96DT6 458 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms