RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	GREM1	O60565	184 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	PDE8A	O60658	829 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	PF4	P02776	101 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	S100B	P04271	92 aa	Predicted RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	HOXC6	P09630	235 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	ATP2A2	P16615	1042 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	GART	P22102	1010 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	PRKAR2B	P31323	418 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	GYS2	P54840	703 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	NFIA	Q12857	509 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	TTLL4	Q14679	1199 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SMAD2	Q15796	467 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	DUOXA2	Q1HG44	320 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	TMEM67	Q5HYA8	995 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	EXOSC6	Q5RKV6	272 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	MFSD14B	Q5SR56	506 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	PRAMEF19	Q5SWL8	479 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	MFSD14C	Q5VZR4	134 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	PLEKHH3	Q7Z736	793 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	AMOTL1	Q8IY63	956 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	TMEM130	Q8N3G9	435 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	DCLK2	Q8N568	766 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SLC43A3	Q8NBI5	491 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	TTLL11	Q8NHH1	800 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	GRIN3A	Q8TCU5	1115 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	STAG1	Q8WVM7	1258 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	GAL3ST3	Q96A11	431 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	EDC3	Q96F86	508 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	NACC1	Q96RE7	527 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SPON2	Q9BUD6	331 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	USP26	Q9BXU7	913 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SUGCT	Q9HAC7	445 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	LMCD1	Q9NZU5	365 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	ADAMTS1	Q9UHI8	967 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	SUPT16H	Q9Y5B9	1047 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	CDK5RAP2	Q96SN8	1893 aa		6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZNFX1	Q9P2E3	1918 aa	Known RBP	6.23	□□□□□ -1.41
PABPC1-223	ENST00000523636	CCDC189	A1A4V9	331 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	C9orf172	C9J069	976 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	FAM229A	H3BQW9	127 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	DDX3Y	O15523	660 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	CNMD	O75829	334 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	ERVK-24	P63145	666 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	NRG1	Q02297	640 aa	Predicted RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	SIGLEC14	Q08ET2	396 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	GNL2	Q13823	731 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	SNAP47	Q5SQN1	464 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	CCDC174	Q6PII3	467 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	FILIP1	Q7Z7B0	1213 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	FMNL3	Q8IVF7	1028 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	SDR16C5	Q8N3Y7	309 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	TMEM199	Q8N511	208 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	PLBD2	Q8NHP8	589 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	FAM151A	Q8WW52	585 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	LENG1	Q96BZ8	264 aa	Predicted RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	CHAMP1	Q96JM3	812 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	NT5C1A	Q9BXI3	368 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	TMPRSS13	Q9BYE2	586 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	WNT8A	Q9H1J5	351 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	ACBD3	Q9H3P7	528 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	CCDC86	Q9H6F5	360 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	PANK3	Q9H999	370 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	JADE2	Q9NQC1	790 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	IFT57	Q9NWB7	429 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	DDX56	Q9NY93	547 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	FBXO9	Q9UK97	447 aa	Predicted RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	MRPL42	Q9Y6G3	142 aa	Known RBP	6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	SLC4A7	Q9Y6M7	1214 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	MYO9A	B2RTY4	2548 aa		6.22	□□□□□ -1.41
PABPC1-223	ENST00000523636	DCDC2C	A8MYV0	355 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	ANP32C	O43423	234 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	PRC1	O43663	620 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZNF500	O60304	480 aa	Predicted RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	TAF5L	O75529	589 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	ECEL1	O95672	775 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	PGK1	P00558	417 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CD4	P01730	458 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CTSB	P07858	339 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	HSD3B2	P26439	372 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	COL8A1	P27658	744 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	MAPK4	P31152	587 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	GSK3A	P49840	483 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	HMGCS2	P54868	508 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CTSW	P56202	376 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	HERVK_113	P62684	666 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CHRND	Q07001	517 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	DLX2	Q07687	328 aa	Predicted RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	KCNMA1	Q12791	1236 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	GRB14	Q14449	540 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	MCTP2	Q6DN12	878 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CCSAP	Q6IQ19	270 aa	Predicted RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	FBXL19	Q6PCT2	694 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	KIAA1211	Q6ZU35	1233 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	GPRC5A	Q8NFJ5	357 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	RASGRP4	Q8TDF6	673 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	IPO4	Q8TEX9	1081 aa	Known RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	UBASH3B	Q8TF42	649 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	GATAD2B	Q8WXI9	593 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	HOOK2	Q96ED9	719 aa		6.21	□□□□□ -1.42

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