RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DAAM2Q86T65 1068 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 LMNTD2Q8IXW0 634 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NRSN1Q8IZ57 195 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 THEMISQ8N1K5 641 aaPredicted RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 CCDC33Q8N5R6 958 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 RNF152Q8N8N0 203 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ANKRD52Q8NB46 1076 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NPLOC4Q8TAT6 608 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 VWCEQ96DN2 955 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 TREX2Q9BQ50 279 aaPredicted RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 SDF4Q9BRK5 362 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 BOCQ9BWV1 1114 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 QRSL1Q9H0R6 528 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 PICK1Q9NRD5 415 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 OLA1Q9NTK5 396 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 NSMCE4AQ9NXX6 385 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 LRFN1Q9P244 771 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 TMEFF2Q9UIK5 374 aaPredicted RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 ITGB1BP2Q9UKP3 347 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FBXL21Q9UKT6 434 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 CBLCQ9ULV8 474 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PCDHB12Q9Y5F1 795 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ACKR2O00590 384 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 DVL2O14641 736 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 HOXC11O43248 304 aaPredicted RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 ZBED4O75132 1171 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 THP07101 528 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 HARSP12081 509 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 LCP1P13796 627 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 XBP1P17861 261 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FGFR3P22607 806 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 RXRBP28702 533 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NPTX2P47972 431 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ALDH9A1P49189 494 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ITGA8P53708 1063 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NR1H2P55055 460 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NAP1L1P55209 391 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 ERVK-24P63145 666 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ST5P78524 1137 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 HNRNPUQ00839 825 aaKnown RBP eCLIP4.64□□□□□ -1.67
SKP1-209ENST00000522552 CTBSQ01459 385 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 NEUROD1Q13562 356 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 SPARCL1Q14515 664 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PSMD6Q15008 389 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FSCN1Q16658 493 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 NBPF9Q3BBW0 867 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PRAMEF13Q5VWM6 474 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FRMD7Q6ZUT3 714 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 KCNK18Q7Z418 384 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FAM35AQ86V20 835 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 CCDC103Q8IW40 242 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 SIRT2Q8IXJ6 389 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 GALNT15Q8N3T1 639 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 SVOPQ8N4V2 548 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 MSL3Q8N5Y2 521 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 FLCNQ8NFG4 579 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 OR10H5Q8NGA6 315 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 PPP1R13LQ8WUF5 828 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 COPS5Q92905 334 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 FBXW5Q969U6 566 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 SH3KBP1Q96B97 665 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ASB2Q96Q27 587 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 UBE2OQ9C0C9 1292 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 SMG9Q9H0W8 520 aaKnown RBP4.64□□□□□ -1.67
SKP1-209ENST00000522552 ZMAT4Q9H898 229 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 IPPKQ9H8X2 491 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 GPRC5CQ9NQ84 441 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 IRAK4Q9NWZ3 460 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 ZNF112Q9UJU3 913 aa4.64□□□□□ -1.67
SKP1-209ENST00000522552 COL17A1Q9UMD9 1497 aaPredicted RBP4.63□□□□□ -1.67
SKP1-209ENST00000522552 USP19O94966 1318 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 A0A087X0M5 115 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 A0A1B0GX30 115 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 A0A1W2PPH5 198 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 TTC36A6NLP5 189 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 C19orf81C9J6K1 198 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 GSTA4O15217 222 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 MEFVO15553 781 aaPredicted RBP4.63□□□□□ -1.67
SKP1-209ENST00000522552 ITIH2P19823 946 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 PSMA3P25788 255 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 SNX16P57768 344 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 C19orf57Q0VDD7 668 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 NEXNQ0ZGT2 675 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 TESK1Q15569 626 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 ZNF174Q15697 407 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 KIZQ2M2Z5 673 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 CFAP58Q5T655 872 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 LMBR1LQ6UX01 489 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 C16orf59Q7L2K0 433 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 C7orf31Q8N865 590 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 ARL10Q8N8L6 244 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 ZNF507Q8TCN5 953 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 AFAP1L1Q8TED9 768 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 IPCEF1Q8WWN9 437 aaPredicted RBP4.63□□□□□ -1.67
SKP1-209ENST00000522552 VMP1Q96GC9 406 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 MCMBPQ9BTE3 642 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 WDR18Q9BV38 432 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 NDFIP2Q9NV92 336 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 DACT1Q9NYF0 836 aa4.63□□□□□ -1.67
SKP1-209ENST00000522552 GDF2Q9UK05 429 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms