RNA–Protein interactions for RNA: ENST00000521545.6

LAPTM4B-203, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4B, Length 915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-203ENST00000521545 DDX25Q9UHL0 483 aaKnown RBP29.23■■■□□ 2.27
LAPTM4B-203ENST00000521545 PCDHB7Q9Y5E2 793 aa29.23■■■□□ 2.27
LAPTM4B-203ENST00000521545 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 SARSP49591 514 aaKnown RBP29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 CLCN3P51790 818 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 WASF1Q92558 559 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 MBOAT7Q96N66 472 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 NECAB3Q96P71 396 aaPredicted RBP29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 ADAM2Q99965 735 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 PLVAPQ9BX97 442 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 C1orf112Q9NSG2 853 aa29.22■■■□□ 2.27
LAPTM4B-203ENST00000521545 GPR32O75388 356 aa29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 AK2P54819 239 aa29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 UGCGQ16739 394 aa29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 LETM2Q2VYF4 491 aa29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 NSUN3Q9H649 340 aaKnown RBP29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 RGS18Q9NS28 235 aa29.21■■■□□ 2.27
LAPTM4B-203ENST00000521545 LINC00271P0C7V0 271 aa29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 NLRP11P59045 1033 aaKnown RBP29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 TBC1D8BQ0IIM8 1120 aa29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 PAN2Q504Q3 1202 aaKnown RBP29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 SLC24A5Q71RS6 500 aa29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 LRRC71Q8N4P6 559 aa29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 ETNPPLQ8TBG4 499 aa29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 ORC3Q9UBD5 711 aaPredicted RBP29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 MRPL42Q9Y6G3 142 aaKnown RBP29.2■■■□□ 2.26
LAPTM4B-203ENST00000521545 MGEA5O60502 916 aa29.19■■■□□ 2.26
LAPTM4B-203ENST00000521545 KCNA5P22460 613 aa29.19■■■□□ 2.26
LAPTM4B-203ENST00000521545 TCEAL5Q5H9L2 206 aa29.19■■■□□ 2.26
LAPTM4B-203ENST00000521545 FAM228AQ86W67 206 aa29.19■■■□□ 2.26
LAPTM4B-203ENST00000521545 WDR81Q562E7 1941 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 GRM6O15303 877 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 NAALADL2Q58DX5 795 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 XKR3Q5GH77 459 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 NEK8Q86SG6 692 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 LINC01465Q8N7H1 131 aa29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 SEPT9Q9UHD8 586 aaPredicted RBP29.18■■■□□ 2.26
LAPTM4B-203ENST00000521545 GCFC2P16383 781 aaKnown RBP29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 LEXMQ3ZCV2 418 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 B3GNT9Q6UX72 402 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 P2RX5Q93086 422 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 FAM20AQ96MK3 541 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 SCLT1Q96NL6 688 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 NAP1L4Q99733 375 aaKnown RBP29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 NIFKQ9BYG3 293 aaKnown RBP29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 NCOR1O75376 2440 aa29.17■■■□□ 2.26
LAPTM4B-203ENST00000521545 NCK2O43639 380 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 MARCH6O60337 910 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 CTDNEP1O95476 244 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 EIF4BP23588 611 aaKnown RBP29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 PPP4R3AQ6IN85 833 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 EP400NLQ6ZTU2 488 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 PIK3AP1Q6ZUJ8 805 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 ADAMTS10Q9H324 1103 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 GJB4Q9NTQ9 266 aa29.16■■■□□ 2.26
LAPTM4B-203ENST00000521545 C9IYK1 514 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 SLC37A4O43826 429 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 DTNBO60941 627 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 CENPBP07199 599 aaPredicted RBP29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 GATMP50440 423 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 TARBP2Q15633 366 aaKnown RBP29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 MTERF2Q49AM1 385 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 NECAB1Q8N987 351 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 PABPC5Q96DU9 382 aaKnown RBP29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 ATP6V0A4Q9HBG4 840 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 BRMS1Q9HCU9 246 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 ALG13Q9NP73 1137 aaKnown RBP29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 PLAGL2Q9UPG8 496 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 BRWD1Q9NSI6 2320 aa29.15■■■□□ 2.26
LAPTM4B-203ENST00000521545 DDX11L8A8MPP1 907 aa29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 CCNT1O60563 726 aaKnown RBP29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 ZSCAN20P17040 1043 aaPredicted RBP29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 DNM2P50570 870 aa29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 NEK4P51957 841 aa29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 CDC42EP1Q00587 391 aa29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 SPOUT1Q5T280 376 aaKnown RBP29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 OXER1Q8TDS5 423 aa29.14■■■□□ 2.26
LAPTM4B-203ENST00000521545 BDP1A6H8Y1 2624 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 TBKBP1A7MCY6 615 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 MMP1P03956 469 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 GPC3P51654 580 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 PSMC5P62195 406 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 FAM189BP81408 668 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 DSC3Q14574 896 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 ME3Q16798 604 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 PUS10Q3MIT2 529 aaKnown RBP29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 NLRP7Q8WX94 980 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 ZNF668Q96K58 619 aaPredicted RBP29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 ELAC1Q9H777 363 aaKnown RBP29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 KCNMB3Q9NPA1 279 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 AAASQ9NRG9 546 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 TMEM161AQ9NX61 479 aa29.13■■■□□ 2.25
LAPTM4B-203ENST00000521545 DKC1O60832 514 aaKnown RBP eCLIP29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 KRT2P35908 639 aa29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 PPP2R5CQ13362 524 aa29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 FAM102BQ5T8I3 360 aa29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 KLHL23Q8NBE8 558 aa29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 GADD45GIP1Q8TAE8 222 aaPredicted RBP29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 GTF3C6Q969F1 213 aa29.12■■■□□ 2.25
LAPTM4B-203ENST00000521545 CLDND1Q9NY35 253 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms