RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 LRCH2Q5VUJ6 765 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 FASTKD5Q7L8L6 764 aaKnown RBP20.07■□□□□ 0.8
SDC2-202ENST00000518385 SUGP1Q8IWZ8 645 aaKnown RBP20.07■□□□□ 0.8
SDC2-202ENST00000518385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.07■□□□□ 0.87e-9■■■■■ 72.6
SDC2-202ENST00000518385 TRERF1Q96PN7 1200 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 SH3GL2Q99962 352 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 EIF2AK1Q9BQI3 630 aaKnown RBP20.07■□□□□ 0.8
SDC2-202ENST00000518385 MXRA8Q9BRK3 442 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 NUCKS1Q9H1E3 243 aaKnown RBP20.07■□□□□ 0.8
SDC2-202ENST00000518385 SEMA6BQ9H3T3 888 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 SUGCTQ9HAC7 445 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 LCMT1Q9UIC8 334 aa20.07■□□□□ 0.8
SDC2-202ENST00000518385 GOLGA6CA6NDK9 693 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 EYA4O95677 639 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 SSBP05455 408 aaKnown RBP eCLIP20.06■□□□□ 0.8
SDC2-202ENST00000518385 GOLGA6DP0CG33 693 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 USP8P40818 1118 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 TBC1D8BQ0IIM8 1120 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 SNAPC2Q13487 334 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 CYP2W1Q8TAV3 490 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 NEK9Q8TD19 979 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 CAVIN3Q969G5 261 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 HSD17B14Q9BPX1 270 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 GOLGA6AQ9NYA3 693 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 AGTPBP1Q9UPW5 1226 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 HYOU1Q9Y4L1 999 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 FRMPD4Q14CM0 1322 aa20.06■□□□□ 0.8
SDC2-202ENST00000518385 PJA2O43164 708 aa20.05■□□□□ 0.8
SDC2-202ENST00000518385 ALAS1P13196 640 aa20.05■□□□□ 0.8
SDC2-202ENST00000518385 SKOR1P84550 965 aa20.05■□□□□ 0.8
SDC2-202ENST00000518385 ICE2Q659A1 982 aa20.05■□□□□ 0.8
SDC2-202ENST00000518385 XRRA1Q6P2D8 792 aa20.05■□□□□ 0.8
SDC2-202ENST00000518385 RNF10Q8N5U6 811 aaKnown RBP20.05■□□□□ 0.8
SDC2-202ENST00000518385 LUC7LQ9NQ29 371 aaKnown RBP20.05■□□□□ 0.8
SDC2-202ENST00000518385 ZNF214Q9UL59 606 aaPredicted RBP20.05■□□□□ 0.8
SDC2-202ENST00000518385 POTEFA5A3E0 1075 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 EBAG9O00559 213 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 TRIM66O15016 1216 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 ZEB2O60315 1214 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 GAS7O60861 476 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 COBLO75128 1261 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 KRT18P05783 430 aaKnown RBP20.04■□□□□ 0.8
SDC2-202ENST00000518385 TMEM132BQ14DG7 1078 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 EPHA7Q15375 998 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 PCNX4Q63HM2 1172 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 POTEGQ6S5H5 508 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 POTEEQ6S8J3 1075 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 PPP4R3CPQ6ZMV5 832 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 CNOT6LQ96LI5 555 aaKnown RBP20.04■□□□□ 0.8
SDC2-202ENST00000518385 CCDC42Q96M95 316 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 ZNF577Q9BSK1 485 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 TEKT3Q9BXF9 490 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 KCND2Q9NZV8 630 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 PLAGL2Q9UPG8 496 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 PCDHA2Q9Y5H9 948 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 GNA14O95837 355 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 ABL1P00519 1130 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 PAFAH1B1P43034 410 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 ARSHQ5FYA8 562 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 EMC10Q5UCC4 262 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 GPAT2Q6NUI2 795 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 B3GNT9Q6UX72 402 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 B4GALNT4Q76KP1 1039 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 TADA2BQ86TJ2 420 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 EIF1ADQ8N9N8 165 aaKnown RBP20.04■□□□□ 0.8
SDC2-202ENST00000518385 CEP63Q96MT8 703 aa20.04■□□□□ 0.8
SDC2-202ENST00000518385 NFIBO00712 420 aa20.03■□□□□ 0.8
SDC2-202ENST00000518385 MTIF2P46199 727 aaKnown RBP20.03■□□□□ 0.8
SDC2-202ENST00000518385 FKBP3Q00688 224 aaKnown RBP20.03■□□□□ 0.8
SDC2-202ENST00000518385 PABPC4Q13310 644 aaKnown RBP eCLIP20.03■□□□□ 0.8
SDC2-202ENST00000518385 GIT2Q14161 759 aa20.03■□□□□ 0.8
SDC2-202ENST00000518385 TKFCQ3LXA3 575 aa20.03■□□□□ 0.8
SDC2-202ENST00000518385 HERC4Q5GLZ8 1057 aaPredicted RBP20.03■□□□□ 0.8
SDC2-202ENST00000518385 LBX2Q6XYB7 198 aa20.03■□□□□ 0.8
SDC2-202ENST00000518385 NACC1Q96RE7 527 aa20.03■□□□□ 0.8
SDC2-202ENST00000518385 RBBP6Q7Z6E9 1792 aaKnown RBP20.03■□□□□ 0.8
SDC2-202ENST00000518385 COL11A1P12107 1806 aaPredicted RBP20.03■□□□□ 0.8
SDC2-202ENST00000518385 TRPM7Q96QT4 1865 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 GAP43P17677 238 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 GGCXP38435 758 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 IRX3P78415 501 aaPredicted RBP20.02■□□□□ 0.8
SDC2-202ENST00000518385 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
SDC2-202ENST00000518385 SYTL5Q8TDW5 730 aaPredicted RBP20.02■□□□□ 0.8
SDC2-202ENST00000518385 MS4A4AQ96JQ5 239 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 RUFY1Q96T51 708 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 ASCC2Q9H1I8 757 aaPredicted RBP20.02■□□□□ 0.8
SDC2-202ENST00000518385 RIPK3Q9Y572 518 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 UBIAD1Q9Y5Z9 338 aa20.02■□□□□ 0.8
SDC2-202ENST00000518385 SSU72P8A0A1W2PR75 194 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 IPO5O00410 1097 aaKnown RBP20.01■□□□□ 0.79
SDC2-202ENST00000518385 EML1O00423 815 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 HSF2BPO75031 334 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 SLITRK3O94933 977 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 CETPP11597 493 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 GTF2A2P52657 109 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 ZCWPW2Q504Y3 356 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 HPS3Q969F9 1004 aa20.01■□□□□ 0.79
SDC2-202ENST00000518385 NOC4LQ9BVI4 516 aaKnown RBP20.01■□□□□ 0.79
SDC2-202ENST00000518385 CAPS2Q9BXY5 557 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms