RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 CALM1P0DP23 149 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 CALM2P0DP24 149 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 CALM3P0DP25 149 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 SCG2P13521 617 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 SLC1A4P43007 532 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 CDK8P49336 464 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 PPP2R5BQ15173 497 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 TAF11Q15544 211 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 DDX42Q86XP3 938 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 RTKN2Q8IZC4 609 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 EPAS1Q99814 870 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 ZNF287Q9HBT7 754 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 DISC1Q9NRI5 854 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 SAMD15Q9P1V8 674 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 MTMR7Q9Y216 660 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 PCDHAC2Q9Y5I4 1007 aa15.12■□□□□ 0.01
ATP13A1-214ENST00000497556 UBOX5O94941 541 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 FTCDO95954 541 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 FLT3P36888 993 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 SF3A3Q12874 501 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■■ 33.1
ATP13A1-214ENST00000497556 SLC35G1Q2M3R5 365 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 ASTE1Q2TB18 679 aaPredicted RBP15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 STAG2Q8N3U4 1231 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 KLHL23Q8NBE8 558 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 ZDHHC15Q96MV8 337 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 NOC4LQ9BVI4 516 aaKnown RBP15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 GOLGA6L10A0A0M3HER8 536 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 EIF4E1BA6NMX2 242 aaKnown RBP15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 PALMO75781 387 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 KRT16P08779 473 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 FCER1AP12319 257 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 CHN1P15882 459 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 ZNF131P52739 623 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 RNASE9P60153 205 aaKnown RBP15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 GFPT1Q06210 699 aaPredicted RBP15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 TMC3Q7Z5M5 1100 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 LRRC34Q8IZ02 419 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 B4GALNT2Q8NHY0 566 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 ADAM22Q9P0K1 906 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 PNMA2Q9UL42 364 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 ASB3Q9Y575 518 aa15.11■□□□□ 0.01
ATP13A1-214ENST00000497556 COL4A5P29400 1685 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 F8VZ95 297 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 ABLIM1O14639 778 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 MAP3K13O43283 966 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 NPTXRO95502 500 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 KIF5BP33176 963 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 MTIF2P46199 727 aaKnown RBP15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 CCDC38Q502W7 563 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 MEI1Q5TIA1 1274 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 DGKHQ86XP1 1220 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 ECT2Q9H8V3 914 aa15.1■□□□□ 0.01
ATP13A1-214ENST00000497556 LRRD1A4D1F6 860 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 RNF8O76064 485 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 POLD1P28340 1107 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 APLFQ8IW19 511 aaPredicted RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 GIMAP8Q8ND71 665 aaPredicted RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 TEKT4Q8WW24 435 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 ELAC2Q9BQ52 826 aaKnown RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 ZNF277Q9NRM2 450 aaPredicted RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 LMCD1Q9NZU5 365 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 PACSIN2Q9UNF0 486 aaPredicted RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 SIK3Q9Y2K2 1263 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 SPDYE5A6NIY4 337 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 LRRC53A6NM62 1247 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 MYBL1P10243 752 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 NFIAQ12857 509 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 STK4Q13043 487 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 PDIA5Q14554 519 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 R3HDM1Q15032 1099 aaKnown RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 PFKFB3Q16875 520 aaPredicted RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 INF2Q27J81 1249 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 GALNTL6Q49A17 601 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 SPATA21Q7Z572 469 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 TRIM74Q86UV6 250 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 TRIM73Q86UV7 250 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 FAM114A1Q8IWE2 563 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 PAIP2Q9BPZ3 127 aaKnown RBP15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 CPVLQ9H3G5 476 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 TCP11L1Q9NUJ3 509 aa15.09■□□□□ 0.01
ATP13A1-214ENST00000497556 RHOBTB3O94955 611 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 MSH2P43246 934 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 TUBP50607 506 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 MXRA7P84157 204 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 KIAA0753Q2KHM9 967 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 PPP1R15BQ5SWA1 713 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 PNMA1Q8ND90 353 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 ANKS1AQ92625 1134 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 DHTKD1Q96HY7 919 aaPredicted RBP15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 PLCD4Q9BRC7 762 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 MRIQ9BWK5 157 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 ADAM7Q9H2U9 754 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 ARHGEF3Q9NR81 526 aa15.08■□□□□ 0.01
ATP13A1-214ENST00000497556 FAM207AQ9NSI2 230 aaPredicted RBP15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms