RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 TCTN1Q2MV58 587 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 HABP4Q5JVS0 413 aaKnown RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 FBXO47Q5MNV8 452 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 RASIP1Q5U651 963 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 DBF4BQ8NFT6 615 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 ZNF396Q96N95 335 aaPredicted RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 TFIP11Q9UBB9 837 aaKnown RBP15.12■□□□□ 0.01
COL1A1-208ENST00000494334 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 AKT3Q9Y243 479 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 KDM3AQ9Y4C1 1321 aa15.12■□□□□ 0.01
COL1A1-208ENST00000494334 RANBP2P49792 3224 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 GPR32O75388 356 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 GHRP10912 638 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 LONP1P36776 959 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 RFC5P40937 340 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 POLGP54098 1239 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 LPIN1Q14693 890 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 KIZQ2M2Z5 673 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 PLEKHG4Q58EX7 1191 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 CNKSR3Q6P9H4 555 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 EXOC8Q8IYI6 725 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 LINC00301Q8NCQ3 95 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 SLC7A3Q8WY07 619 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 RNPC3Q96LT9 517 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 AK8Q96MA6 479 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 MAP7D2Q96T17 732 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 PPP1R16BQ96T49 567 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 JPH2Q9BR39 696 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 BMP2KQ9NSY1 1161 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 DDX19AQ9NUU7 478 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 CXXC1Q9P0U4 656 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 FBXO2Q9UK22 296 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 DBR1Q9UK59 544 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 GINS2Q9Y248 185 aa15.11■□□□□ 0.01
COL1A1-208ENST00000494334 SRPRBQ9Y5M8 271 aaKnown RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 MORC2Q9Y6X9 1032 aaPredicted RBP15.11■□□□□ 0.01
COL1A1-208ENST00000494334 SCN5AQ14524 2016 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 DGAT1O75907 488 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 ACTN1P12814 892 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 DNM2P50570 870 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 GPC3P51654 580 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 NLRP11P59045 1033 aaKnown RBP15.1■□□□□ 0.01
COL1A1-208ENST00000494334 EMC2Q15006 297 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 LRIT3Q3SXY7 679 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 HYIQ5T013 277 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 CLIC6Q96NY7 704 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 PNMA5Q96PV4 448 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 ADAMTS10Q9H324 1103 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 AGO3Q9H9G7 860 aaKnown RBP15.1■□□□□ 0.01
COL1A1-208ENST00000494334 XPNPEP1Q9NQW7 623 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 SUCLA2Q9P2R7 463 aaPredicted RBP15.1■□□□□ 0.01
COL1A1-208ENST00000494334 SQORQ9Y6N5 450 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
COL1A1-208ENST00000494334 E9PMD0 336 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 DDIT3P35638 169 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 CRYBB1P53674 252 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 DNM1Q05193 864 aaKnown RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 GRB10Q13322 594 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 STK38Q15208 465 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 ZRSR1Q15695 479 aaKnown RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 TSHZ1Q6ZSZ6 1077 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 CABP7Q86V35 215 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 USP38Q8NB14 1042 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 TET1Q8NFU7 2136 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 TMEM40Q8WWA1 233 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 SEPT8Q92599 483 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 TMEM143Q96AN5 459 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 ZNF668Q96K58 619 aaPredicted RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 CCDC43Q96MW1 224 aaKnown RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 OSMRQ99650 979 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 MTRQ99707 1265 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 IFIH1Q9BYX4 1025 aaKnown RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 CSRNP2Q9H175 543 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 MTIF3Q9H2K0 278 aaKnown RBP15.09■□□□□ 0.01
COL1A1-208ENST00000494334 BHMT2Q9H2M3 363 aa15.09■□□□□ 0.01
COL1A1-208ENST00000494334 ABHD14A-ACY1A0A1B0GW23 586 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 ZBBXA8MT70 800 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 SPTLC2O15270 562 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 GAS2O43903 313 aaKnown RBP15.08■□□□□ 0
COL1A1-208ENST00000494334 USO1O60763 962 aaKnown RBP15.08■□□□□ 0
COL1A1-208ENST00000494334 PPP6R2O75170 966 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 BAIAP3O94812 1187 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 YEATS4O95619 227 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 CD52P31358 61 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 UBA7P41226 1012 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 CDC42EP1Q00587 391 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 IKBKEQ14164 716 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 SPECC1Q5M775 1068 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 ATL3Q6DD88 541 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 KCNK18Q7Z418 384 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 RHPN2Q8IUC4 686 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 KSR1Q8IVT5 923 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 TCP11Q8WWU5 503 aa15.08■□□□□ 0
COL1A1-208ENST00000494334 APBB2Q92870 758 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms