RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 STBD1O95210 358 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 RPLP2P05387 115 aaKnown RBP13.83□□□□□ -0.2
SNX17-208ENST00000493711 LIG1P18858 919 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 ATP4AP20648 1035 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 MARK3P27448 753 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 RARRES1P49788 294 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
SNX17-208ENST00000493711 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 SESTD1Q86VW0 696 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 ZNF710Q8N1W2 664 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 RETREG2Q8NC44 543 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 MCPH1Q8NEM0 835 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 KBTBD4Q9NVX7 518 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 DACT1Q9NYF0 836 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 KCNG1Q9UIX4 513 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 KIAA1217Q5T5P2 1943 aa13.83□□□□□ -0.2
SNX17-208ENST00000493711 MYH15Q9Y2K3 1946 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
SNX17-208ENST00000493711 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 ACTN4O43707 911 aaKnown RBP13.82□□□□□ -0.2
SNX17-208ENST00000493711 NR1I2O75469 434 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 SSBP05455 408 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNX17-208ENST00000493711 SMIM10L2AP0DMW4 78 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 SMIM10L2BP0DMW5 78 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 INSRRP14616 1297 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 GUCY2CP25092 1073 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 DNM2P50570 870 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 FXR1P51114 621 aaKnown RBP eCLIP13.82□□□□□ -0.2
SNX17-208ENST00000493711 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 PSMC6P62333 389 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 TBC1D8BQ0IIM8 1120 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 NFKBIBQ15653 356 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 GRIK4Q16099 956 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 KLHL40Q2TBA0 621 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 NBPF20Q3BBV1 942 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 CNNM4Q6P4Q7 775 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 PADI6Q6TGC4 694 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 KCNK18Q7Z418 384 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 GTPBP4Q9BZE4 634 aaKnown RBP13.82□□□□□ -0.2
SNX17-208ENST00000493711 STARD7Q9NQZ5 370 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 SERTAD1Q9UHV2 236 aa13.82□□□□□ -0.2
SNX17-208ENST00000493711 MAFO75444 373 aaPredicted RBP13.81□□□□□ -0.2
SNX17-208ENST00000493711 SMC2O95347 1197 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
SNX17-208ENST00000493711 CYP11B2P19099 503 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 TMOD1P28289 359 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 POLGP54098 1239 aaPredicted RBP13.81□□□□□ -0.2
SNX17-208ENST00000493711 CDC42EP1Q00587 391 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 ITGA7Q13683 1181 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 MCM6Q14566 821 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 MTERF2Q49AM1 385 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 SLC43A3Q8NBI5 491 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 TCP11Q8WWU5 503 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
SNX17-208ENST00000493711 PAGE5Q96GU1 130 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 C7orf25Q9BPX7 421 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 ATP6V0A4Q9HBG4 840 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 ODF2LQ9ULJ1 636 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 CENPFP49454 3210 aa13.81□□□□□ -0.2
SNX17-208ENST00000493711 HTTP42858 3142 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 MCM3APO60318 1980 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
SNX17-208ENST00000493711 SCP2P22307 547 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 HOXC8P31273 242 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 NPEPPSP55786 919 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 CHMP4BP1P59074 171 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 RINT1Q6NUQ1 792 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 C1orf186Q6ZWK4 172 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 GPT2Q8TD30 523 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 KIFAP3Q92845 792 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 DRC1Q96MC2 740 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 TMEM121BQ9BXQ6 578 aaPredicted RBP13.8□□□□□ -0.2
SNX17-208ENST00000493711 NUP62CLQ9H1M0 184 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 CLSTN2Q9H4D0 955 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 DHX33Q9H6R0 707 aaKnown RBP13.8□□□□□ -0.2
SNX17-208ENST00000493711 C17orf75Q9HAS0 396 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 HDAC6Q9UBN7 1215 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 GTF2IRD1Q9UHL9 959 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 MROH7Q68CQ1 1323 aa13.8□□□□□ -0.2
SNX17-208ENST00000493711 IGKV6-21A0A0C4DH24 114 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 PVALEFA0A1B0GWK0 134 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 MBLAC1A4D2B0 266 aaPredicted RBP13.79□□□□□ -0.2
SNX17-208ENST00000493711 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 ARVCFO00192 962 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 ZBTB39O15060 712 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 ASAP2O43150 1006 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
SNX17-208ENST00000493711 TBCAO75347 108 aaKnown RBP13.79□□□□□ -0.2
SNX17-208ENST00000493711 C22orf31O95567 290 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 COL6A1P12109 1028 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 GAP43P17677 238 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 KLRC1P26715 233 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 DHX8Q14562 1220 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 899.8 ms