RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ANKRD45Q5TZF3 282 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 CCDC149Q6ZUS6 474 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 OTOP3Q7RTS5 596 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 PLPPR4Q7Z2D5 763 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 CYP2W1Q8TAV3 490 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 SDF4Q9BRK5 362 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 DSCC1Q9BVC3 393 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 MRPL9Q9BYD2 267 aaKnown RBP8.76□□□□□ -1.01
PDPN-205ENST00000487038 SPG21Q9NZD8 308 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 PKD2L1Q9P0L9 805 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 HCSTQ9UBK5 93 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 SLC9A2Q9UBY0 812 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 LIMD1Q9UGP4 676 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 ST3GAL5Q9UNP4 418 aa8.76□□□□□ -1.01
PDPN-205ENST00000487038 COL1A2P08123 1366 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 PKD1L2Q7Z442 2459 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 C2orf71A6NGG8 1288 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 STK25O00506 426 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 CYTH3O43739 400 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 MGEA5O60502 916 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 ATP9AO75110 1047 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 ZSCAN20P17040 1043 aaPredicted RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 SDSP20132 328 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 SDHBP21912 280 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 STAT5BP51692 787 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 PLCB4Q15147 1175 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 NONOQ15233 471 aaKnown RBP eCLIP8.75□□□□□ -1.01
PDPN-205ENST00000487038 USP17L6PQ6QN14 398 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 MTHFD1LQ6UB35 978 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 CWC27Q6UX04 472 aaKnown RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 SIX5Q8N196 739 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 MRPL43Q8N983 215 aaKnown RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 TRAPPC12Q8WVT3 735 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 RSPH1Q8WYR4 309 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 RUBCNQ92622 972 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 ZBTB10Q96DT7 871 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 RRP36Q96EU6 259 aaKnown RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 TMEM169Q96HH4 297 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 SFXN1Q9H9B4 322 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 CDH22Q9UJ99 828 aa8.75□□□□□ -1.01
PDPN-205ENST00000487038 NOC2LQ9Y3T9 749 aaKnown RBP8.75□□□□□ -1.01
PDPN-205ENST00000487038 MYH15Q9Y2K3 1946 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 MEIS2O14770 477 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 IFIT3O14879 490 aaKnown RBP8.74□□□□□ -1.01
PDPN-205ENST00000487038 HBP1O60381 514 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CLASP2O75122 1294 aaKnown RBP8.74□□□□□ -1.01
PDPN-205ENST00000487038 WEE2P0C1S8 567 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 ALDH7A1P49419 539 aaKnown RBP8.74□□□□□ -1.01
PDPN-205ENST00000487038 WTAPQ15007 396 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 FAM160B1Q5W0V3 765 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CATIPQ7Z7H3 387 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CABP7Q86V35 215 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 PPFIBP1Q86W92 1011 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CTCFLQ8NI51 663 aaPredicted RBP8.74□□□□□ -1.01
PDPN-205ENST00000487038 PIBF1Q8WXW3 757 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CNTNAP3BQ96NU0 1288 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 CNTNAP3Q9BZ76 1288 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 JADE2Q9NQC1 790 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 DLL3Q9NYJ7 618 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 IGSF9Q9P2J2 1179 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 NFASCO94856 1347 aa8.74□□□□□ -1.01
PDPN-205ENST00000487038 MTCL1Q9Y4B5 1905 aaKnown RBP8.74□□□□□ -1.01
PDPN-205ENST00000487038 FASNP49327 2511 aaKnown RBP8.73□□□□□ -1.01
PDPN-205ENST00000487038 PI15O43692 258 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 KRT37O76014 449 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 NPR3P17342 541 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 ITGB5P18084 799 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 KLRC1P26715 233 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 KIF5BP33176 963 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 PBX3P40426 434 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 CRYBB1P53674 252 aaPredicted RBP8.73□□□□□ -1.01
PDPN-205ENST00000487038 TBC1D8BQ0IIM8 1120 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 ELMSAN1Q6PJG2 1045 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 RALYLQ86SE5 291 aaKnown RBP8.73□□□□□ -1.01
PDPN-205ENST00000487038 FAM228AQ86W67 206 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 SLC39A11Q8N1S5 342 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 TMEM40Q8WWA1 233 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 BORCS6Q96GS4 357 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 CASD1Q96PB1 797 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 PCYT2Q99447 389 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 OSMRQ99650 979 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 SPZ1Q9BXG8 430 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 WNT16Q9UBV4 365 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 STK39Q9UEW8 545 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 PCDHB15Q9Y5E8 787 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 UBIAD1Q9Y5Z9 338 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 IRAK3Q9Y616 596 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 R4GN57 208 aa8.73□□□□□ -1.01
PDPN-205ENST00000487038 BACH1O14867 736 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 KINO60870 393 aaKnown RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 CXCL14O95715 111 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 METAP2P50579 478 aaKnown RBP eCLIP8.72□□□□□ -1.01
PDPN-205ENST00000487038 POLGP54098 1239 aaPredicted RBP8.72□□□□□ -1.01
PDPN-205ENST00000487038 ACTR2P61160 394 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 FAM189BP81408 668 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 TROAPQ12815 778 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 KIZQ2M2Z5 673 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
PDPN-205ENST00000487038 LETM2Q2VYF4 491 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms