RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 FAM228AQ86W67 206 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 ZNF710Q8N1W2 664 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 LINC01465Q8N7H1 131 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 RDM1Q8NG50 284 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 NEK9Q8TD19 979 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 P2RX5Q93086 422 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 PABPC5Q96DU9 382 aaKnown RBP10.64□□□□□ -0.71
NUP50-215ENST00000484186 MBOAT7Q96N66 472 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 MAP7D2Q96T17 732 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 SLKQ9H2G2 1235 aaPredicted RBP10.64□□□□□ -0.71
NUP50-215ENST00000484186 ALG13Q9NP73 1137 aaKnown RBP10.64□□□□□ -0.71
NUP50-215ENST00000484186 KCNJ14Q9UNX9 436 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 PLAGL2Q9UPG8 496 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 AKT3Q9Y243 479 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 RALGAPA2Q2PPJ7 1873 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
NUP50-215ENST00000484186 EVPLQ92817 2033 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
NUP50-215ENST00000484186 XIRP2A4UGR9 3374 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 LOXHD1Q8IVV2 1947 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 C9IYK1 514 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 PFKFB2O60825 505 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 TDP2O95551 362 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 MMP1P03956 469 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 XBP1P17861 261 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 IBSPP21815 317 aaPredicted RBP10.63□□□□□ -0.71
NUP50-215ENST00000484186 GATMP50440 423 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 NLRP11P59045 1033 aaKnown RBP10.63□□□□□ -0.71
NUP50-215ENST00000484186 ANAPC15P60006 121 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 FAM189BP81408 668 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 PRKCEQ02156 737 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 COL19A1Q14993 1142 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 INF2Q27J81 1249 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 PTCRAQ6ISU1 281 aaPredicted RBP10.63□□□□□ -0.71
NUP50-215ENST00000484186 B3GNT9Q6UX72 402 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 EP400NLQ6ZTU2 488 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 KRT25Q7Z3Z0 450 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 LRRC71Q8N4P6 559 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 ETNPPLQ8TBG4 499 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 PHF20Q9BVI0 1012 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 ADAMTS10Q9H324 1103 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 DDX25Q9UHL0 483 aaKnown RBP10.63□□□□□ -0.71
NUP50-215ENST00000484186 TPCN1Q9ULQ1 816 aa10.63□□□□□ -0.71
NUP50-215ENST00000484186 NCOR1O75376 2440 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 TBKBP1A7MCY6 615 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 H3BQ06 376 aaPredicted RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 ITGB1P05556 798 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 IL9P15248 144 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 ZSCAN20P17040 1043 aaPredicted RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 EIF4BP23588 611 aaKnown RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 TBC1D8BQ0IIM8 1120 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 CAMK1Q14012 370 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 DSC3Q14574 896 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 ANKRD1Q15327 319 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 TARBP2Q15633 366 aaKnown RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 LETM2Q2VYF4 491 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 XKR3Q5GH77 459 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 FAM102BQ5T8I3 360 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 FAM178BQ8IXR5 827 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 KLHL23Q8NBE8 558 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 SPPL3Q8TCT6 385 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 C1QTNF1Q9BXJ1 281 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 NIFKQ9BYG3 293 aaKnown RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 ELAC1Q9H777 363 aaKnown RBP10.62□□□□□ -0.71
NUP50-215ENST00000484186 ATP6V0A4Q9HBG4 840 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 CLDND1Q9NY35 253 aa10.62□□□□□ -0.71
NUP50-215ENST00000484186 MUC3AQ02505 3323 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 STK36Q9NRP7 1315 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 BRWD1Q9NSI6 2320 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 CCDC194A0A1B0GVG4 234 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 STBD1O95210 358 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 COL9A1P20849 921 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 DNAJB1P25685 340 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 LTBRP36941 435 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 GPC3P51654 580 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 AK2P54819 239 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 HYAL1Q12794 435 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 SPOUT1Q5T280 376 aaKnown RBP10.61□□□□□ -0.71
NUP50-215ENST00000484186 PPP4R3AQ6IN85 833 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 POF1BQ8WVV4 589 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 WASF1Q92558 559 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 ZNF668Q96K58 619 aaPredicted RBP10.61□□□□□ -0.71
NUP50-215ENST00000484186 FAM20AQ96MK3 541 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 CEP89Q96ST8 783 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 IGFLR1Q9H665 355 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 EPHX3Q9H6B9 360 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 CD320Q9NPF0 282 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 AAASQ9NRG9 546 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 TYW1Q9NV66 732 aaKnown RBP10.61□□□□□ -0.71
NUP50-215ENST00000484186 TMEM161AQ9NX61 479 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 SEPT9Q9UHD8 586 aaPredicted RBP10.61□□□□□ -0.71
NUP50-215ENST00000484186 FAM50BQ9Y247 325 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 PCDHB12Q9Y5F1 795 aa10.61□□□□□ -0.71
NUP50-215ENST00000484186 IGKV6-21A0A0C4DH24 114 aa10.6□□□□□ -0.71
NUP50-215ENST00000484186 DDX11L8A8MPP1 907 aa10.6□□□□□ -0.71
NUP50-215ENST00000484186 SLC37A4O43826 429 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms