RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 TUT1Q9H6E5 874 aaKnown RBP7.82□□□□□ -1.16
HDAC3-206ENST00000471968 SPG21Q9NZD8 308 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 ANKMY1Q9P2S6 941 aa7.82□□□□□ -1.16
HDAC3-206ENST00000471968 NXF1Q9UBU9 619 aaKnown RBP7.82□□□□□ -1.16
HDAC3-206ENST00000471968 MYO5AQ9Y4I1 1855 aaKnown RBP7.82□□□□□ -1.16
HDAC3-206ENST00000471968 POLQO75417 2590 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 COL6A6A6NMZ7 2263 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 CCDC195A0A1B0GUA6 201 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 FAM205CA6NFA0 338 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 B4DLN1 442 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 SLC28A2O43868 658 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 FGFR1P11362 822 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 SARSP49591 514 aaKnown RBP7.81□□□□□ -1.16
HDAC3-206ENST00000471968 MRPL12P52815 198 aaKnown RBP7.81□□□□□ -1.16
HDAC3-206ENST00000471968 HSDL1Q3SXM5 330 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 SLFN13Q68D06 897 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 RAB44Q7Z6P3 723 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-206ENST00000471968 FAM160B2Q86V87 743 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 PPFIBP1Q86W92 1011 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 VPS52Q8N1B4 723 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 STAG1Q8WVM7 1258 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 SPATA33Q96N06 139 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 DCBLD2Q96PD2 775 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 IER2Q9BTL4 223 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 HEBP1Q9NRV9 189 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.81□□□□□ -1.16
HDAC3-206ENST00000471968 CDY2AQ9Y6F7 541 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 FLNCQ14315 2725 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 SETD2Q9BYW2 2564 aaPredicted RBP7.81□□□□□ -1.16
HDAC3-206ENST00000471968 MGAQ8IWI9 3026 aa7.81□□□□□ -1.16
HDAC3-206ENST00000471968 LRRK2Q5S007 2527 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 B8ZZF3 427 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 K7ESF4 209 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 CDX4O14627 284 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-206ENST00000471968 ICAM1P05362 532 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 MYBP10242 640 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 HOXC13P31276 330 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 RARSP54136 660 aaKnown RBP7.8□□□□□ -1.16
HDAC3-206ENST00000471968 RPS6P62753 249 aaKnown RBP7.8□□□□□ -1.16
HDAC3-206ENST00000471968 CCDC158Q5M9N0 1113 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 PCSK4Q6UW60 755 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 CCNI2Q6ZMN8 369 aaPredicted RBP7.8□□□□□ -1.16
HDAC3-206ENST00000471968 LRRC55Q6ZSA7 311 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 LMBR1Q8WVP7 490 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 ZBP1Q9H171 429 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 PRORYQ9H606 182 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 LMAN1LQ9HAT1 526 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 PADI3Q9ULW8 664 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 MRVI1Q9Y6F6 885 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 DOCK8Q8NF50 2099 aa7.8□□□□□ -1.16
HDAC3-206ENST00000471968 FANCIQ9NVI1 1328 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 FNDC1Q4ZHG4 1894 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 INPPL1O15357 1258 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 RPP40O75818 363 aaKnown RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 CAVIN2O95810 425 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 CCDC192P0DO97 292 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 KLRC2P26717 231 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 ALDH7A1P49419 539 aaKnown RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 CLCN4P51793 760 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 CREB5Q02930 508 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 EXOSC9Q06265 439 aaKnown RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 PAK2Q13177 524 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 GIT2Q14161 759 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 GAS6Q14393 721 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 C12orf60Q5U649 245 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 RSPH3Q86UC2 560 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 SCUBE3Q8IX30 993 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 ZNF687Q8N1G0 1237 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 SLC39A11Q8N1S5 342 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 GMCL1P1Q8NEA9 526 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 CMASQ8NFW8 434 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 SMG7Q92540 1137 aaKnown RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 PHKBQ93100 1093 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 FCRL3Q96P31 734 aaPredicted RBP7.79□□□□□ -1.16
HDAC3-206ENST00000471968 TMX1Q9H3N1 280 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 MAN1C1Q9NR34 630 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 PRR12Q9ULL5 1215 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 LAMA4Q16363 1823 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 LOXHD1Q8IVV2 1947 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 MYH15Q9Y2K3 1946 aa7.79□□□□□ -1.16
HDAC3-206ENST00000471968 NT5C1B-RDH14C9J2C7 533 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 PRKAB2O43741 272 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 RFPL2O75678 378 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 LGALS2P05162 132 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 UBTFL1P0CB47 393 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-206ENST00000471968 POU3F2P20265 443 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-206ENST00000471968 ITPKBP27987 946 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 SLC1A4P43007 532 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 METAP2P50579 478 aaKnown RBP eCLIP7.78□□□□□ -1.16
HDAC3-206ENST00000471968 ADAM17P78536 824 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 ZNF423Q2M1K9 1284 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 TAF1BQ53T94 588 aaPredicted RBP7.78□□□□□ -1.16
HDAC3-206ENST00000471968 MYSM1Q5VVJ2 828 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 TAF2Q6P1X5 1199 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 KCTD1Q719H9 257 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 WDR5BQ86VZ2 330 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 AMOTL1Q8IY63 956 aa7.78□□□□□ -1.16
HDAC3-206ENST00000471968 STK11IPQ8N1F8 1099 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms