RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SCN5AQ14524 2016 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 SMIM35A0A1B0GVV1 85 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 TMEM150BA6NC51 233 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 DDX11L8A8MPP1 907 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 CUTAO60888 179 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 CYP2C9P11712 490 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 RFC5P40937 340 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 UBA7P41226 1012 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 RARRES1P49788 294 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 BFSP2Q13515 415 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 TMEM119Q4V9L6 283 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 CABP7Q86V35 215 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 USP38Q8NB14 1042 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 JPH2Q9BR39 696 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 HIPK3Q9H422 1215 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
CDC42SE1-203ENST00000470278 IGKV6-21A0A0C4DH24 114 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 GAS2O43903 313 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 KLRC1P26715 233 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 TXLNAP40222 546 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 TBC1D8BQ0IIM8 1120 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 GRB10Q13322 594 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 MTERF2Q49AM1 385 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 AXDND1Q5T1B0 1012 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 RASIP1Q5U651 963 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 TRMT1LQ7Z2T5 733 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 RETREG2Q8NC44 543 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 MAFAQ8NHW3 353 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 WNT8BQ93098 351 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 CALML4Q96GE6 196 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 CHAMP1Q96JM3 812 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 SIP14410 1827 aa16.66■□□□□ 0.26
CDC42SE1-203ENST00000470278 ZBTB39O15060 712 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 MAFO75444 373 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 DGAT1O75907 488 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 TIMP1P01033 207 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 ME1P48163 572 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 NPEPPSP55786 919 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 XKR9Q5GH70 373 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 RSPH3Q86UC2 560 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 PIGOQ8TEQ8 1089 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 SLC7A3Q8WY07 619 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 VWCEQ96DN2 955 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 RNPC3Q96LT9 517 aaKnown RBP16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.65■□□□□ 0.267e-7■□□□□ 9.3
CDC42SE1-203ENST00000470278 PCDHA7Q9UN72 937 aa16.65■□□□□ 0.26
CDC42SE1-203ENST00000470278 PTPRSQ13332 1948 aa16.64■□□□□ 0.26
CDC42SE1-203ENST00000470278 EYA4O95677 639 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 CKBP12277 381 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 RAG1P15918 1043 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 SELPP16109 830 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 POLGP54098 1239 aaPredicted RBP16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 FPGSQ05932 587 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 TRAF7Q6Q0C0 670 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 ZNF710Q8N1W2 664 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 NME8Q8N427 588 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 ZBTB10Q96DT7 871 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 WNT8AQ9H1J5 351 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 DNM3Q9UQ16 869 aa16.64■□□□□ 0.25
CDC42SE1-203ENST00000470278 EVPLQ92817 2033 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 PARNO95453 639 aaKnown RBP16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 PLCG1P19174 1290 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 TMOD1P28289 359 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 THPOP40225 353 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 GRIN2CQ14957 1233 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 EMC2Q15006 297 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 FAM26DQ5JW98 314 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 MFSD5Q6N075 450 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 EFCAB12Q6NXP0 572 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 LRRC8DQ7L1W4 858 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 KIAA0319LQ8IZA0 1049 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 SH2D3AQ9BRG2 576 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 BHMT2Q9H2M3 363 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 STK17AQ9UEE5 414 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 CCDC39Q9UFE4 941 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 UMODL1Q5DID0 1318 aa16.63■□□□□ 0.25
CDC42SE1-203ENST00000470278 TMEM265A0A087WTH1 108 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms