RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 GPR182O15218 404 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 CALM1P0DP23 149 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 CALM2P0DP24 149 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 CALM3P0DP25 149 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 LAG3P18627 525 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 MCM5P33992 734 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 NBL1P41271 181 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 APOBRQ0VD83 1088 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 ZNF484Q5JVG2 852 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 PPP1R18Q6NYC8 613 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 THNSL1Q8IYQ7 743 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 SDF4Q9BRK5 362 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 TMEM117Q9H0C3 514 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 ADAMTS10Q9H324 1103 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 CDH22Q9UJ99 828 aa13.91□□□□□ -0.18
UBR4-211ENST00000467272 MAFBQ9Y5Q3 323 aaPredicted RBP13.91□□□□□ -0.18
UBR4-211ENST00000467272 LOXHD1Q8IVV2 1947 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 FAM86B1E9PN63 330 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 BRD1O95696 1058 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
UBR4-211ENST00000467272 FAM86B2P0C5J1 330 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 TECP42680 631 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 ASCL5Q7RTU5 278 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 ZNF598Q86UK7 904 aaKnown RBP13.9□□□□□ -0.18
UBR4-211ENST00000467272 UBALD2Q8IYN6 164 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 TMEM105Q8N8V8 129 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 MRPL43Q8N983 215 aaKnown RBP13.9□□□□□ -0.18
UBR4-211ENST00000467272 KREMEN2Q8NCW0 462 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 TCF25Q9BQ70 676 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
UBR4-211ENST00000467272 ADAM7Q9H2U9 754 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 ATP6V0A4Q9HBG4 840 aa13.9□□□□□ -0.18
UBR4-211ENST00000467272 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.19
UBR4-211ENST00000467272 DENND3A2RUS2 1198 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 C2orf71A6NGG8 1288 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 CYP3A4P08684 503 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 FOXK2Q01167 660 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 NECTIN1Q15223 517 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 KIZQ2M2Z5 673 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 ODR4Q5SWX8 454 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 PLPP4Q5VZY2 271 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 CASC1Q6TDU7 716 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 ATOH1Q92858 354 aaPredicted RBP13.89□□□□□ -0.19
UBR4-211ENST00000467272 PGBD1Q96JS3 809 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 OSMRQ99650 979 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 ANO3Q9BYT9 981 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 POMKQ9H5K3 350 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 SORCS3Q9UPU3 1222 aa13.89□□□□□ -0.19
UBR4-211ENST00000467272 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 C2CD4DB7Z1M9 353 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 H0Y858 1186 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 SRGAP2BP0DMP2 458 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 PPM1AP35813 382 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 ITIH3Q06033 890 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 AP3B2Q13367 1082 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 CLLU1OSQ5K130 101 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 SLC39A11Q8N1S5 342 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 CCDC82Q8N4S0 544 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 BBXQ8WY36 941 aaPredicted RBP13.88□□□□□ -0.19
UBR4-211ENST00000467272 NECTIN4Q96NY8 510 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 ZNF302Q9NR11 478 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 FAM217BQ9NTX9 383 aaPredicted RBP13.88□□□□□ -0.19
UBR4-211ENST00000467272 HCFC2Q9Y5Z7 792 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 IRAK3Q9Y616 596 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 SLC12A7Q9Y666 1083 aa13.88□□□□□ -0.19
UBR4-211ENST00000467272 PRR23AA6NEV1 266 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 SLC27A2O14975 620 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 ADAMTS3O15072 1205 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 CLASP2O75122 1294 aaKnown RBP13.87□□□□□ -0.19
UBR4-211ENST00000467272 PBX3P40426 434 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 MTMR3Q13615 1198 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
UBR4-211ENST00000467272 FAM160B1Q5W0V3 765 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 SWSAP1Q6NVH7 229 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 ECHDC2Q86YB7 292 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 ZDHHC14Q8IZN3 488 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 LRRC43Q8N309 656 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 CASP10Q92851 521 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 ZNF558Q96NG5 402 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 SMOC2Q9H3U7 446 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 BARHL2Q9NY43 387 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 PUF60Q9UHX1 559 aaKnown RBP13.87□□□□□ -0.19
UBR4-211ENST00000467272 GINS2Q9Y248 185 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 NR2E1Q9Y466 385 aa13.87□□□□□ -0.19
UBR4-211ENST00000467272 EP300Q09472 2414 aaPredicted RBP13.87□□□□□ -0.19
UBR4-211ENST00000467272 A0A0U1RQF3 1178 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 hCG_1984214I3L0E3 225 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 IPO5O00410 1097 aaKnown RBP13.86□□□□□ -0.19
UBR4-211ENST00000467272 HOXA2O43364 376 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 EDIL3O43854 480 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 VTNP04004 478 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 ADCY7P51828 1080 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 EXOSC10Q01780 885 aaKnown RBP13.86□□□□□ -0.19
UBR4-211ENST00000467272 TPRNQ4KMQ1 711 aa13.86□□□□□ -0.19
UBR4-211ENST00000467272 ZNF746Q6NUN9 644 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms