RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 RFC5P40937 340 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 POLGP54098 1239 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 CNKSR3Q6P9H4 555 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 CCDC43Q96MW1 224 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 ZNF396Q96N95 335 aaPredicted RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 USP28Q96RU2 1077 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 OSBPL7Q9BZF2 842 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 MTIF3Q9H2K0 278 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 DHX33Q9H6R0 707 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 GINS2Q9Y248 185 aa16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 LAMA2P24043 3122 aaKnown RBP16.2■□□□□ 0.18
SQSTM1-205ENST00000464493 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 GPR32O75388 356 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 RARRES1P49788 294 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 MKRN4PQ13434 485 aaPredicted RBP16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 DRP2Q13474 957 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 LPIN1Q14693 890 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 ECM1Q16610 540 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 KIZQ2M2Z5 673 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 LRIT3Q3SXY7 679 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 PLEKHG4Q58EX7 1191 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 FBXO47Q5MNV8 452 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 RASIP1Q5U651 963 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 DBF4BQ8NFT6 615 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 AK8Q96MA6 479 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 MMTAG2Q9BU76 263 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 CXXC1Q9P0U4 656 aaPredicted RBP16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 DBR1Q9UK59 544 aaKnown RBP16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 KIAA1024Q9UPX6 916 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 SQORQ9Y6N5 450 aa16.19■□□□□ 0.18
SQSTM1-205ENST00000464493 MYH15Q9Y2K3 1946 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 SIP14410 1827 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 ZBBXA8MT70 800 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 BAIAP3O94812 1187 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 BRD1O95696 1058 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 GHRP10912 638 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 MARCKSP29966 332 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 LONP1P36776 959 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 CRYBB1P53674 252 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 NLRP11P59045 1033 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 IKBKEQ14164 716 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 SLC39A14Q15043 492 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 FOXD4L6Q3SYB3 417 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 FOXD4L3Q6VB84 417 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 USP38Q8NB14 1042 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 SEPT8Q92599 483 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 IFIH1Q9BYX4 1025 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 CDHR5Q9HBB8 845 aa16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 DDX19AQ9NUU7 478 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 SUCLA2Q9P2R7 463 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 TFIP11Q9UBB9 837 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 SRPRBQ9Y5M8 271 aaKnown RBP16.18■□□□□ 0.18
SQSTM1-205ENST00000464493 LOXHD1Q8IVV2 1947 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 ARID2Q68CP9 1835 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 RBAK-RBAKDNI3L0D1 243 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 GAS2O43903 313 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 DGAT1O75907 488 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 UBA7P41226 1012 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 GPC3P51654 580 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 GRIN1Q05586 938 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 EMC2Q15006 297 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 STK38Q15208 465 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 ZRSR1Q15695 479 aaKnown RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 TCTN1Q2MV58 587 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 TSHZ1Q6ZSZ6 1077 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 TCP11Q8WWU5 503 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 APBB2Q92870 758 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 OSMRQ99650 979 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 MTRQ99707 1265 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 ADAMTS10Q9H324 1103 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 BMP2KQ9NSY1 1161 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 DNM3Q9UQ16 869 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 ZDHHC9Q9Y397 364 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 SLC4A7Q9Y6M7 1214 aa16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 MORC2Q9Y6X9 1032 aaPredicted RBP16.17■□□□□ 0.18
SQSTM1-205ENST00000464493 EFCAB14O75071 495 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 HYIQ5T013 277 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 CABP7Q86V35 215 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 RHPN2Q8IUC4 686 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 LINC00301Q8NCQ3 95 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 CDK5RAP3Q96JB5 506 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 NT5C3AQ9H0P0 336 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 AGO3Q9H9G7 860 aaKnown RBP16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 ATP6V0A4Q9HBG4 840 aa16.16■□□□□ 0.18
SQSTM1-205ENST00000464493 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-205ENST00000464493 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.15■□□□□ 0.18
SQSTM1-205ENST00000464493 ARHGEF35A5YM69 484 aa16.15■□□□□ 0.18
SQSTM1-205ENST00000464493 ASAP2O43150 1006 aa16.15■□□□□ 0.18
SQSTM1-205ENST00000464493 SLC26A4O43511 780 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 299.7 ms