RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 POF1BQ8WVV4 589 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 LENG9Q96B70 501 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 RIT2Q99578 217 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 OSMRQ99650 979 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 UPF3BQ9BZI7 483 aaKnown RBP23.46■■□□□ 1.35
CPNE1-219ENST00000440240 DISC1Q9NRI5 854 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 VPS54Q9P1Q0 977 aa23.46■■□□□ 1.35
CPNE1-219ENST00000440240 C19orf67A6NJJ6 358 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 PPFIA3O75145 1194 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 CSPG5O95196 566 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 VTNP04004 478 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 NLRP5P59047 1200 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 FAM189BP81408 668 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 UBE3AQ05086 875 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 SPOUT1Q5T280 376 aaKnown RBP23.45■■□□□ 1.34
CPNE1-219ENST00000440240 RUFY3Q7L099 469 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 MAP7D2Q96T17 732 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 C22orf23Q9BZE7 217 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 ELAC1Q9H777 363 aaKnown RBP23.45■■□□□ 1.34
CPNE1-219ENST00000440240 ATP6V0A4Q9HBG4 840 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 LOXHD1Q8IVV2 1947 aa23.45■■□□□ 1.34
CPNE1-219ENST00000440240 FAM86C2PA6NEL3 165 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 TBKBP1A7MCY6 615 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 PRR33A8MZF0 331 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 MBTPS2O43462 519 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 SFNP31947 248 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 GTF2F1P35269 517 aaKnown RBP eCLIP23.44■■□□□ 1.346e-10■■■□□ 14.7
CPNE1-219ENST00000440240 FAM102BQ5T8I3 360 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 EFCAB12Q6NXP0 572 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 FAM228AQ86W67 206 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 PPP1R16BQ96T49 567 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 POP1Q99575 1024 aaKnown RBP23.44■■□□□ 1.34
CPNE1-219ENST00000440240 NCOA5Q9HCD5 579 aaKnown RBP23.44■■□□□ 1.34
CPNE1-219ENST00000440240 ZSWIM6Q9HCJ5 1215 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 TMEM161AQ9NX61 479 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 CD207Q9UJ71 328 aa23.44■■□□□ 1.34
CPNE1-219ENST00000440240 EVPLQ92817 2033 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 MSH4O15457 936 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 DCXO43602 365 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 GAS7O60861 476 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 NDUFV1P49821 464 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 NLRP11P59045 1033 aaKnown RBP23.43■■□□□ 1.34
CPNE1-219ENST00000440240 SSRP1Q08945 709 aaKnown RBP23.43■■□□□ 1.34
CPNE1-219ENST00000440240 SMAD4Q13485 552 aaKnown RBP23.43■■□□□ 1.34
CPNE1-219ENST00000440240 CLUL1Q15846 466 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 CSPP1Q1MSJ5 1256 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 EFHBQ8N7U6 833 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 MICAL1Q8TDZ2 1067 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 AKT3Q9Y243 479 aa23.43■■□□□ 1.34
CPNE1-219ENST00000440240 MYH9P35579 1960 aaKnown RBP23.42■■□□□ 1.34
CPNE1-219ENST00000440240 LINC01565O15544 149 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 EDIL3O43854 480 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 TBX10O75333 385 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 OATP04181 439 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 ZSCAN20P17040 1043 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-219ENST00000440240 IRS1P35568 1242 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 CLCN3P51790 818 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 JAK3P52333 1124 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 LRCH2Q5VUJ6 765 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 SLC5A5Q92911 643 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 TEKT3Q9BXF9 490 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 TYW1Q9NV66 732 aaKnown RBP23.42■■□□□ 1.34
CPNE1-219ENST00000440240 PCDHA4Q9UN74 947 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 CYP46A1Q9Y6A2 500 aa23.42■■□□□ 1.34
CPNE1-219ENST00000440240 CPLX1O14810 134 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 HOXA2O43364 376 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 ZNF862O60290 1169 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 EIF4BP23588 611 aaKnown RBP23.41■■□□□ 1.34
CPNE1-219ENST00000440240 DSC3Q14574 896 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 ADGRD2Q7Z7M1 963 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 LINC01465Q8N7H1 131 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 RDM1Q8NG50 284 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 TBCKQ8TEA7 893 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-219ENST00000440240 ADAMTS10Q9H324 1103 aa23.41■■□□□ 1.34
CPNE1-219ENST00000440240 FGF18O76093 207 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 DEXIO95424 95 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 EYA4O95677 639 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 NRIP1P48552 1158 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 PRKCEQ02156 737 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 TOB2Q14106 344 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-219ENST00000440240 Q4G0T1 1027 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 PDE12Q6L8Q7 609 aaKnown RBP23.4■■□□□ 1.34
CPNE1-219ENST00000440240 CPLX2Q6PUV4 134 aaKnown RBP23.4■■□□□ 1.34
CPNE1-219ENST00000440240 RBM23Q86U06 439 aaKnown RBP23.4■■□□□ 1.34
CPNE1-219ENST00000440240 FAM177A1Q8N128 213 aaPredicted RBP23.4■■□□□ 1.34
CPNE1-219ENST00000440240 LRRC71Q8N4P6 559 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 MSLNLQ96KJ4 702 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 TLE6Q9H808 572 aa23.4■■□□□ 1.34
CPNE1-219ENST00000440240 CYP3A7-CYP3A51PA0A087WV96 503 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 FSD2A1L4K1 749 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 CHMP2AO43633 222 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 FGFR1P11362 822 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 LAG3P18627 525 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 CYP3A7P24462 503 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 CDC42EP1Q00587 391 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 TBC1D8BQ0IIM8 1120 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 GALNT17Q6IS24 598 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 THNSL1Q8IYQ7 743 aa23.39■■□□□ 1.33
CPNE1-219ENST00000440240 TM6SF1Q9BZW5 370 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms