RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 NBNO60934 754 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 SFNP31947 248 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TECP42680 631 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 FXR1P51114 621 aaKnown RBP eCLIP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 JAK3P52333 1124 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 ADAM17P78536 824 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 CTTNQ14247 550 aaKnown RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 GPNMBQ14956 572 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 CALCRLQ16602 461 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 UGCGQ16739 394 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TCTN1Q2MV58 587 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TRIM71Q2Q1W2 868 aaKnown RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF484Q5JVG2 852 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TTC38Q5R3I4 469 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM109BQ6ICB4 259 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 MTHFD1LQ6UB35 978 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 MOXD1Q6UVY6 613 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 THSD4Q6ZMP0 1018 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TMCO2Q7Z6W1 182 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 NOSTRINQ8IVI9 506 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TPH2Q8IWU9 490 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 METTL13Q8N6R0 699 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 ETNPPLQ8TBG4 499 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 CAGE1Q8TC20 777 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 AFAP1L1Q8TED9 768 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 ATP8B4Q8TF62 1192 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TNPO1Q92973 898 aaKnown RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 VWCEQ96DN2 955 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM20AQ96MK3 541 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 NAP1L4Q99733 375 aaKnown RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 FOXP1Q9H334 677 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TTC12Q9H892 705 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 SUGCTQ9HAC7 445 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 CXXC1Q9P0U4 656 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TUBE1Q9UJT0 475 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 GINS2Q9Y248 185 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 MAFBQ9Y5Q3 323 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 CENPFP49454 3210 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 GBF1Q92538 1859 aa6.49□□□□□ -1.37
HMGB3P24-201ENST00000433260 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 A0A1W2PPC1 479 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 VPS37CA5D8V6 355 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZBTB39O15060 712 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 TBX3O15119 743 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF862O60290 1169 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 NEMFO60524 1076 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 CHRNA1P02708 482 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 ACTN1P12814 892 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 GCFC2P16383 781 aaKnown RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 NDUFV2P19404 249 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 IBSPP21815 317 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 HOXC8P31273 242 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 RFC2P35250 354 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLC26A2P50443 739 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 TOB1P50616 345 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 RABGGTBP53611 331 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 CYP4A11Q02928 519 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 MBTPS1Q14703 1052 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 EPHA7Q15375 998 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 LRIT3Q3SXY7 679 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 MTERF2Q49AM1 385 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 EFCAB12Q6NXP0 572 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 FAM117BQ6P1L5 589 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 PSRC1Q6PGN9 363 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 TRAF7Q6Q0C0 670 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 Q7L0L9 218 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 RSPH3Q86UC2 560 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 FERMT3Q86UX7 667 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLFN12Q8IYM2 578 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 DBF4BQ8NFT6 615 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 HERVK_113Q902F9 699 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 DYDC2Q96IM9 177 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZNF668Q96K58 619 aaPredicted RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 TMEM60Q9H2L4 133 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 KCNMB3Q9NPA1 279 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 VAV3Q9UKW4 847 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 NOL7Q9UMY1 257 aaKnown RBP6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 KIF3AQ9Y496 699 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 PCDHB6Q9Y5E3 794 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 PCDHA2Q9Y5H9 948 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLC4A7Q9Y6M7 1214 aa6.48□□□□□ -1.37
HMGB3P24-201ENST00000433260 MBLAC1A4D2B0 266 aaPredicted RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 ZBTB42B2RXF5 422 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 M0QZ92 97 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 SLITRK3O94933 977 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 UPP2O95045 317 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 STBD1O95210 358 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 P4HBP07237 508 aaKnown RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 MYOGP15173 224 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 U2AF2P26368 475 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 QARSP47897 775 aaKnown RBP6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 NPEPPSP55786 919 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 PSMC5P62195 406 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 PRKCEQ02156 737 aa6.47□□□□□ -1.37
HMGB3P24-201ENST00000433260 PPP2R5CQ13362 524 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms