RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 INSL6Q9Y581 213 aa20.34■□□□□ 0.85
SSR4P1-202ENST00000429427 PRRC2BQ5JSZ5 2229 aaKnown RBP20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 TTC3P53804 2025 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 IGKV6-21A0A0C4DH24 114 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 MAGEB2O15479 319 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 LINC00271P0C7V0 271 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 PSMC5P62195 406 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 PAK2Q13177 524 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 MTERF2Q49AM1 385 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 FAM228AQ86W67 206 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 SLC17A8Q8NDX2 589 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 ZNF668Q96K58 619 aaPredicted RBP20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 MTUS1Q9ULD2 1270 aa20.33■□□□□ 0.85
SSR4P1-202ENST00000429427 ST18O60284 1047 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 NEMFO60524 1076 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 IGFBP4P22692 258 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 QARSP47897 775 aaKnown RBP20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 CRYBB1P53674 252 aaPredicted RBP20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 ERVK-21P61565 698 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 GRB10Q13322 594 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 EPHA7Q15375 998 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 CALCRLQ16602 461 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 NCAPH2Q6IBW4 605 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 SLFN12Q8IYM2 578 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 LXNQ9BS40 222 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 C17orf80Q9BSJ5 609 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 TSPYL2Q9H2G4 693 aaPredicted RBP20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 FOXP1Q9H334 677 aaPredicted RBP20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 UPF2Q9HAU5 1272 aaKnown RBP20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 PRDM6Q9NQX0 595 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 CUL9Q8IWT3 2517 aa20.32■□□□□ 0.84
SSR4P1-202ENST00000429427 DDX11L8A8MPP1 907 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 ZBTB39O15060 712 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 P4HBP07237 508 aaKnown RBP20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 ATP2B1P20020 1258 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 NPEPPSP55786 919 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 NLRP11P59045 1033 aaKnown RBP20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 TBC1D8BQ0IIM8 1120 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 GDPD5Q8WTR4 605 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 DYDC2Q96IM9 177 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 YME1L1Q96TA2 773 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 SUGCTQ9HAC7 445 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 ST3GAL5Q9UNP4 418 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 AKT3Q9Y243 479 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 MTCH2Q9Y6C9 303 aa20.31■□□□□ 0.84
SSR4P1-202ENST00000429427 RPS6KA5O75582 802 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 POU3F3P20264 500 aaPredicted RBP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 MCM7P33993 719 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 GPC3P51654 580 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 CYP4A11Q02928 519 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 CTTNQ14247 550 aaKnown RBP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 SAFBQ15424 915 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 NOSTRINQ8IVI9 506 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 FAM184AQ8NB25 1140 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 ZNF689Q96CS4 500 aaPredicted RBP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 TGS1Q96RS0 853 aaKnown RBP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 HSD17B14Q9BPX1 270 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 FTHL17Q9BXU8 183 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 BACH2Q9BYV9 841 aa20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 TTC12Q9H892 705 aaPredicted RBP20.3■□□□□ 0.84
SSR4P1-202ENST00000429427 MAFO75444 373 aaPredicted RBP20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 SLITRK3O94933 977 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 TXKP42681 527 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 NFX1Q12986 1120 aaKnown RBP20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 NBR1Q14596 966 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 CCDC85BQ15834 202 aaPredicted RBP20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 C4orf19Q8IY42 314 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 PPM1EQ8WY54 764 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 MAP7D2Q96T17 732 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 CYP26B1Q9NR63 512 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 PCDHA12Q9UN75 941 aa20.29■□□□□ 0.84
SSR4P1-202ENST00000429427 POTEMA6NI47 508 aa20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 MARCH6O60337 910 aa20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 DGKIO75912 1065 aa20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 BAG4O95429 457 aaKnown RBP20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 U2AF2P26368 475 aaKnown RBP eCLIP20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 TOB1P50616 345 aaPredicted RBP20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 DSC3Q14574 896 aa20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 ZNF174Q15697 407 aa20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 EIF2AK1Q9BQI3 630 aaKnown RBP20.28■□□□□ 0.84
SSR4P1-202ENST00000429427 ADGRA3Q8IWK6 1321 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 CSDE1O75534 798 aaKnown RBP20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 DARSP14868 501 aaKnown RBP20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 FGFR4P22455 802 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 EIF4BP23588 611 aaKnown RBP20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 TMOD1P28289 359 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 YWHABP31946 246 aaKnown RBP20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 GATMP50440 423 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 KSR1Q8IVT5 923 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 C4orf32Q8N8J7 132 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 ADAM2Q99965 735 aa20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 DHX33Q9H6R0 707 aaKnown RBP20.27■□□□□ 0.84
SSR4P1-202ENST00000429427 ARID2Q68CP9 1835 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 C9IYK1 514 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 EPC2Q52LR7 807 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 TTC38Q5R3I4 469 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 NPAS4Q8IUM7 802 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 MICALL1Q8N3F8 863 aa20.26■□□□□ 0.83
SSR4P1-202ENST00000429427 CEP170P1Q96L14 293 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms