RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PRG4Q92954 1404 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 GOLGA6L22H0YM25 854 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 M0R2C6 588 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 MATN3O15232 486 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 IGFALSP35858 605 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 MOGSQ13724 837 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 EIF4HQ15056 248 aaKnown RBP7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 CCDC144BQ3MJ40 725 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 CATSPEREQ5SY80 951 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 KANK2Q63ZY3 851 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 ZCCHC8Q6NZY4 707 aaKnown RBP7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 LARP4Q71RC2 724 aaKnown RBP eCLIP7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 OTOP1Q7RTM1 612 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 PALM2Q8IXS6 379 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 SH3RF3Q8TEJ3 882 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 SH3TC2Q8TF17 1288 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 NR2E1Q9Y466 385 aa7.2□□□□□ -1.26
HMGB3P5-201ENST00000428894 WRNQ14191 1432 aaPredicted RBP eCLIP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 A0A0G2JNJ9 132 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 PPP1R12AO14974 1030 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 FOXS1O43638 330 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 OPA1O60313 960 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 ASLP04424 464 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 TNFRSF1AP19438 455 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 SELENOPP49908 381 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 MECP2P51608 486 aaKnown RBP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 ARHGAP44Q17R89 818 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 CC2D1AQ6P1N0 951 aaPredicted RBP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 CALML6Q8TD86 181 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 UBXN4Q92575 508 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 KIAA1683Q9H0B3 1180 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 Q9UFV3 132 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 ZFR2Q9UPR6 939 aaKnown RBP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 TNPO3Q9Y5L0 923 aaKnown RBP7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 ADAMTS12P58397 1594 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 TSPOAP1O95153 1857 aa7.19□□□□□ -1.26
HMGB3P5-201ENST00000428894 DIP2BQ9P265 1576 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 ARHGAP6O43182 974 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 DNAJC8O75937 253 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 GLRX3O76003 335 aaKnown RBP7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 CR2P20023 1033 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 PCOLCEQ15113 449 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 TBR1Q16650 682 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 HS1BP3Q53T59 392 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 TMEM200BQ69YZ2 307 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 GRAMD4Q6IC98 578 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 SPRED1Q7Z699 444 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 FILIP1Q7Z7B0 1213 aa7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 C12orf65Q9H3J6 166 aaKnown RBP7.18□□□□□ -1.26
HMGB3P5-201ENST00000428894 APEX1P27695 318 aaKnown RBP7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 MEOX1P50221 254 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 KIF11P52732 1056 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 ZNF460Q14592 562 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 USP30Q70CQ3 517 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 RTKN2Q8IZC4 609 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 CHST14Q8NCH0 376 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 FOXRED1Q96CU9 486 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 DPYSL5Q9BPU6 564 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 SEMA4AQ9H3S1 761 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 TMPRSS5Q9H3S3 457 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 OAZ3Q9UMX2 235 aa7.17□□□□□ -1.26
HMGB3P5-201ENST00000428894 TRAF5O00463 557 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 DVL2O14641 736 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 MUSKO15146 869 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 CDC14BO60729 498 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 ASMTLO95671 621 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 SDSP20132 328 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 MRE11P49959 708 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 ALDH6A1Q02252 535 aaKnown RBP7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 NFYCQ13952 458 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 PIK3R6Q5UE93 754 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 AGBL4Q5VU57 503 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 FUKQ8N0W3 1084 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 CABP5Q9NP86 173 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 TMEM260Q9NX78 707 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 ERICH3Q5RHP9 1530 aa7.16□□□□□ -1.26
HMGB3P5-201ENST00000428894 PTPDC1A2A3K4 754 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 MATN2O00339 956 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 FLT3P36888 993 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 STAT5BP51692 787 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 ZXDAP98168 799 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 R3HDM1Q15032 1099 aaKnown RBP7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 UBE2R2Q712K3 238 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 RTN4RL1Q86UN2 441 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 OR10A2Q9H208 303 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 PIF1Q9H611 641 aa7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 PUF60Q9UHX1 559 aaKnown RBP7.15□□□□□ -1.26
HMGB3P5-201ENST00000428894 RAD17O75943 681 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 FNTBP49356 437 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 CDCA2Q69YH5 1023 aaPredicted RBP7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 FBXO41Q8TF61 875 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 E2F7Q96AV8 911 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 OR14A2Q96R54 314 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 FOXB1Q99853 325 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 ACSS2Q9NR19 701 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 FAM184BQ9ULE4 1060 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 TESMINQ9Y4I5 508 aa7.14□□□□□ -1.27
HMGB3P5-201ENST00000428894 H7C1D1 291 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms