RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 GINS2Q9Y248 185 aa7.98□□□□□ -1.13
LSM8-204ENST00000424702 STX10O60499 249 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 MARK3P27448 753 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 TCF7P36402 384 aaPredicted RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 BMS1Q14692 1282 aaKnown RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 IL17AQ16552 155 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 CELF3Q5SZQ8 465 aaKnown RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 IER5Q5VY09 327 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 CACNA2D4Q7Z3S7 1137 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 IMPG2Q9BZV3 1241 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.97□□□□□ -1.13
LSM8-204ENST00000424702 K7ENM7 598 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 ACTN1P12814 892 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 ATP1A3P13637 1013 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 IBSPP21815 317 aaPredicted RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 RPA1P27694 616 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 PRCPP42785 496 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 CLK2P49760 499 aaKnown RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 EFNA5P52803 228 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 PRKCEQ02156 737 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 GRB10Q13322 594 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 MXD4Q14582 209 aaPredicted RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 KYAT1Q16773 422 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 TAF2Q6P1X5 1199 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 PADI6Q6TGC4 694 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 MAEAQ7L5Y9 396 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 AFG1LQ8WV93 481 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 KMT5AQ9NQR1 393 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 SAMSN1Q9NSI8 373 aaKnown RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 KBTBD4Q9NVX7 518 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 RIPK3Q9Y572 518 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 ARHGEF37A1IGU5 675 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 MOXD2PA6NHM9 499 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 CAPN15O75808 1086 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 LIG4P49917 911 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 YARSP54577 528 aaKnown RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 CACNB1Q02641 598 aaPredicted RBP7.97□□□□□ -1.13
LSM8-204ENST00000424702 ZNF792Q3KQV3 632 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 CCDC144BQ3MJ40 725 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 SPECC1LQ69YQ0 1117 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 REPS2Q8NFH8 660 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 ATP8B4Q8TF62 1192 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 TMEM206Q9H813 350 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 PARVGQ9HBI0 331 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 TXNRD2Q9NNW7 524 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 LRFN2Q9ULH4 789 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 ODF2LQ9ULJ1 636 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 FRMD4BQ9Y2L6 1034 aa7.97□□□□□ -1.13
LSM8-204ENST00000424702 FAM86B1E9PN63 330 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 ZSCAN12O43309 604 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 RHOBTB3O94955 611 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 FAM86B2P0C5J1 330 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 EPB41P11171 864 aaKnown RBP7.96□□□□□ -1.13
LSM8-204ENST00000424702 UBA1P22314 1058 aaKnown RBP7.96□□□□□ -1.13
LSM8-204ENST00000424702 PSEN2P49810 448 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 PPP2R5CQ13362 524 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 SYCP1Q15431 976 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 E2F4Q16254 413 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 FAM43BQ6ZT52 329 aaPredicted RBP7.96□□□□□ -1.13
LSM8-204ENST00000424702 PIGOQ8TEQ8 1089 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 NLRP7Q8WX94 980 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 ACCSQ96QU6 501 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 CFHR5Q9BXR6 569 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 DEF6Q9H4E7 631 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 TSKSQ9UJT2 592 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 ZNF536O15090 1300 aa7.96□□□□□ -1.13
LSM8-204ENST00000424702 A0A0U1RQG5 324 aaPredicted RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 SOWAHBA6NEL2 793 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 COBLO75128 1261 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 ADCYAP1R1P41586 468 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 TRIM14Q14142 442 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 SURF1Q15526 300 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 NT5DC1Q5TFE4 455 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 NECAB2Q7Z6G3 386 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 C4orf19Q8IY42 314 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 BANK1Q8NDB2 785 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 FAM49AQ9H0Q0 323 aaPredicted RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 C17orf75Q9HAS0 396 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 RGL1Q9NZL6 768 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 COL1A2P08123 1366 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 MYMKA6NI61 221 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 LPXNO60711 386 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 ARP10275 920 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 CYP2C9P11712 490 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 EEF1GP26641 437 aaKnown RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 YWHABP31946 246 aaKnown RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 SARSP49591 514 aaKnown RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 MDM2Q00987 491 aaPredicted RBP7.96□□□□□ -1.14
LSM8-204ENST00000424702 GHRHRQ02643 423 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 COASYQ13057 564 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 LRRC41Q15345 812 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 Q3C1V9 767 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 SLFN12LQ6IEE8 588 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 CNGA4Q8IV77 575 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 FMNL3Q8IVF7 1028 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 HVCN1Q96D96 273 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 KCNMB3Q9NPA1 279 aa7.96□□□□□ -1.14
LSM8-204ENST00000424702 MYH4Q9Y623 1939 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms