RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 LBHD1Q9BQE6 289 aaPredicted RBP18.04■□□□□ 0.48
PKP4-204ENST00000421462 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
PKP4-204ENST00000421462 STAT3P40763 770 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 MTMR9Q96QG7 549 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 PABPC3Q9H361 631 aaKnown RBP18.03■□□□□ 0.48
PKP4-204ENST00000421462 NUP98P52948 1817 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 DDX3XO00571 662 aaKnown RBP eCLIP18.03■□□□□ 0.48
PKP4-204ENST00000421462 ACSL3O95573 720 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 PON1P27169 355 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
PKP4-204ENST00000421462 NCALDP61601 193 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 CCDC65Q8IXS2 484 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 ERP44Q9BS26 406 aa18.03■□□□□ 0.48
PKP4-204ENST00000421462 PPFIA2O75334 1257 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 CLSTN1O94985 981 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 CASP4P49662 377 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 UBE4AQ14139 1066 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 PARD3BQ8TEW8 1205 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 EPB41L4BQ9H329 900 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 EBF2Q9HAK2 575 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 PCDHA12Q9UN75 941 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 SLIT2O94813 1529 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 GOLGA6L10A0A0M3HER8 536 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 RARAP10276 462 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 XRCC5P13010 732 aaKnown RBP18.02■□□□□ 0.48
PKP4-204ENST00000421462 COBLL1Q53SF7 1204 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 DCAF12L1Q5VU92 463 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 SEPT14Q6ZU15 432 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 PIGWQ7Z7B1 504 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 JAMLQ86YT9 394 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 LRRC47Q8N1G4 583 aaKnown RBP18.02■□□□□ 0.48
PKP4-204ENST00000421462 TBC1D22AQ8WUA7 517 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 EYA3Q99504 573 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 PAIP2Q9BPZ3 127 aaKnown RBP18.02■□□□□ 0.48
PKP4-204ENST00000421462 NSRP1Q9H0G5 558 aaKnown RBP18.02■□□□□ 0.48
PKP4-204ENST00000421462 GCNT4Q9P109 453 aa18.02■□□□□ 0.48
PKP4-204ENST00000421462 IGSF9BQ9UPX0 1349 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 CCDC88AQ3V6T2 1871 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 RASGRF2O14827 1237 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 PLA2G4BP0C869 781 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 MMP13P45452 471 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 RNASELQ05823 741 aaKnown RBP18.02■□□□□ 0.47
PKP4-204ENST00000421462 PSMD2Q13200 908 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 TBK1Q9UHD2 729 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 PLCH1Q4KWH8 1693 aa18.02■□□□□ 0.47
PKP4-204ENST00000421462 KCNJ1P48048 391 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 SLC8A3P57103 927 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 TNIP1Q15025 636 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 ARHGAP44Q17R89 818 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 KIAA1755Q5JYT7 1200 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 THEMIS2Q5TEJ8 643 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 DDX25Q9UHL0 483 aaKnown RBP18.01■□□□□ 0.47
PKP4-204ENST00000421462 SFI1A8K8P3 1242 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 ASAP2O43150 1006 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 NTSR2O95665 410 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 AFPP02771 609 aaKnown RBP18.01■□□□□ 0.47
PKP4-204ENST00000421462 KCNQ4P56696 695 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 BARGINQ6ZT62 677 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 ZNF483Q8TF39 744 aaPredicted RBP18.01■□□□□ 0.47
PKP4-204ENST00000421462 SAAL1Q96ER3 474 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 SUCLA2Q9P2R7 463 aaPredicted RBP18.01■□□□□ 0.47
PKP4-204ENST00000421462 CACNA1SQ13698 1873 aa18.01■□□□□ 0.47
PKP4-204ENST00000421462 POTEFA5A3E0 1075 aa18■□□□□ 0.47
PKP4-204ENST00000421462 POTEIP0CG38 1075 aa18■□□□□ 0.47
PKP4-204ENST00000421462 ADCY7P51828 1080 aa18■□□□□ 0.47
PKP4-204ENST00000421462 PABPC4Q13310 644 aaKnown RBP eCLIP18■□□□□ 0.47
PKP4-204ENST00000421462 TAF11Q15544 211 aa18■□□□□ 0.47
PKP4-204ENST00000421462 POTEGQ6S5H5 508 aa18■□□□□ 0.47
PKP4-204ENST00000421462 POTEEQ6S8J3 1075 aa18■□□□□ 0.47
PKP4-204ENST00000421462 SYCE1Q8N0S2 351 aa18■□□□□ 0.47
PKP4-204ENST00000421462 CEP63Q96MT8 703 aa18■□□□□ 0.47
PKP4-204ENST00000421462 SPATS2LQ9NUQ6 558 aaKnown RBP18■□□□□ 0.47
PKP4-204ENST00000421462 CTNNAL1Q9UBT7 734 aa18■□□□□ 0.47
PKP4-204ENST00000421462 COL4A1P02462 1669 aa18■□□□□ 0.47
PKP4-204ENST00000421462 ALS2Q96Q42 1657 aa18■□□□□ 0.47
PKP4-204ENST00000421462 PDHA1P08559 390 aa18■□□□□ 0.47
PKP4-204ENST00000421462 CRKLP46109 303 aaKnown RBP18■□□□□ 0.47
PKP4-204ENST00000421462 ITIH4Q14624 930 aa18■□□□□ 0.47
PKP4-204ENST00000421462 GRIK5Q16478 980 aa18■□□□□ 0.47
PKP4-204ENST00000421462 EIF1ADQ8N9N8 165 aaKnown RBP18■□□□□ 0.47
PKP4-204ENST00000421462 SPDYE1Q8NFV5 336 aaPredicted RBP18■□□□□ 0.47
PKP4-204ENST00000421462 CTNNBL1Q8WYA6 563 aaPredicted RBP18■□□□□ 0.47
PKP4-204ENST00000421462 GPR101Q96P66 508 aaPredicted RBP18■□□□□ 0.47
PKP4-204ENST00000421462 MPHOSPH10O00566 681 aaKnown RBP18■□□□□ 0.47
PKP4-204ENST00000421462 SNX3O60493 162 aa18■□□□□ 0.47
PKP4-204ENST00000421462 LRRN2O75325 713 aa18■□□□□ 0.47
PKP4-204ENST00000421462 GNA14O95837 355 aa18■□□□□ 0.47
PKP4-204ENST00000421462 RASA1P20936 1047 aa18■□□□□ 0.47
PKP4-204ENST00000421462 RPL21P46778 160 aaKnown RBP18■□□□□ 0.47
PKP4-204ENST00000421462 MARCKSL1P49006 195 aa18■□□□□ 0.47
PKP4-204ENST00000421462 ARHGEF26Q96DR7 871 aa18■□□□□ 0.47
PKP4-204ENST00000421462 CEP95Q96GE4 821 aa18■□□□□ 0.47
PKP4-204ENST00000421462 L3MBTL3Q96JM7 780 aaPredicted RBP18■□□□□ 0.47
PKP4-204ENST00000421462 TAS2R14Q9NYV8 317 aa18■□□□□ 0.47
PKP4-204ENST00000421462 AFF2P51816 1311 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 H0Y3Z8 333 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 GH1P01241 217 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 FXR2P51116 673 aaKnown RBP eCLIP17.99■□□□□ 0.477e-7■■■□□ 17.6
PKP4-204ENST00000421462 KCNA1Q09470 495 aa17.99■□□□□ 0.47
PKP4-204ENST00000421462 SBK1Q52WX2 424 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms