RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 EPOPA6NHQ4 379 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 TMOD1P28289 359 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 MCM7P33993 719 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 DEFB103AP81534 67 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 MUC3AQ02505 3323 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 TBC1D8BQ0IIM8 1120 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 COL4A6Q14031 1691 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 TTC38Q5R3I4 469 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 NCAPH2Q6IBW4 605 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 TRMT1LQ7Z2T5 733 aaKnown RBP23.97■■□□□ 1.43
CPNE1-211ENST00000420363 C4orf19Q8IY42 314 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 MAP7D2Q96T17 732 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 LXNQ9BS40 222 aa23.97■■□□□ 1.43
CPNE1-211ENST00000420363 TTC12Q9H892 705 aaPredicted RBP23.97■■□□□ 1.43
CPNE1-211ENST00000420363 NCOR1O75376 2440 aa23.96■■□□□ 1.43
CPNE1-211ENST00000420363 ARHGEF15O94989 841 aa23.96■■□□□ 1.43
CPNE1-211ENST00000420363 TFF2Q03403 129 aa23.96■■□□□ 1.43
CPNE1-211ENST00000420363 CEP89Q96ST8 783 aa23.96■■□□□ 1.43
CPNE1-211ENST00000420363 TMEM60Q9H2L4 133 aa23.96■■□□□ 1.43
CPNE1-211ENST00000420363 TRANK1O15050 2925 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 GJB5O95377 273 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 AMHP03971 560 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 OR52Z1P0C646 297 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 ATP2B1P20020 1258 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 TMEM62Q0P6H9 643 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 ANO5Q75V66 913 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 TMCO2Q7Z6W1 182 aaPredicted RBP23.95■■□□□ 1.42
CPNE1-211ENST00000420363 METTL13Q8N6R0 699 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 ZSWIM4Q9H7M6 989 aa23.95■■□□□ 1.42
CPNE1-211ENST00000420363 PRRC2BQ5JSZ5 2229 aaKnown RBP23.94■■□□□ 1.42
CPNE1-211ENST00000420363 IGKV6-21A0A0C4DH24 114 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 H3BQV1 296 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 BMP1P13497 986 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 TXKP42681 527 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 MTERF2Q49AM1 385 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 EFCAB12Q6NXP0 572 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 JPH2Q9BR39 696 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-211ENST00000420363 FTHL17Q9BXU8 183 aa23.94■■□□□ 1.42
CPNE1-211ENST00000420363 WRAP73Q9P2S5 460 aaPredicted RBP23.94■■□□□ 1.42
CPNE1-211ENST00000420363 LYPLA2O95372 231 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 CLCN3P51790 818 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 CRYBB1P53674 252 aaPredicted RBP23.93■■□□□ 1.42
CPNE1-211ENST00000420363 GRB10Q13322 594 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 EXOC8Q8IYI6 725 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 INTS4Q96HW7 963 aaKnown RBP23.93■■□□□ 1.42
CPNE1-211ENST00000420363 DYDC2Q96IM9 177 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 RAD9AQ99638 391 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 HSD17B14Q9BPX1 270 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 EIF2AK1Q9BQI3 630 aaKnown RBP23.93■■□□□ 1.42
CPNE1-211ENST00000420363 AGO3Q9H9G7 860 aaKnown RBP23.93■■□□□ 1.42
CPNE1-211ENST00000420363 CYP26B1Q9NR63 512 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 COG5Q9UP83 839 aa23.93■■□□□ 1.42
CPNE1-211ENST00000420363 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-211ENST00000420363 LCHNA4D1U4 455 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 DDX11L8A8MPP1 907 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 GPR32O75388 356 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 MAFO75444 373 aaPredicted RBP23.92■■□□□ 1.42
CPNE1-211ENST00000420363 CD52P31358 61 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 YWHABP31946 246 aaKnown RBP23.92■■□□□ 1.42
CPNE1-211ENST00000420363 PAK2Q13177 524 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 ZNF174Q15697 407 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 RILPL1Q5EBL4 403 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 ODR4Q5SWX8 454 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.92■■□□□ 1.421e-8■■□□□ 11.7
CPNE1-211ENST00000420363 LRRC71Q8N4P6 559 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 RGL1Q9NZL6 768 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 AKT3Q9Y243 479 aa23.92■■□□□ 1.42
CPNE1-211ENST00000420363 TMEM150BA6NC51 233 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 POTEMA6NI47 508 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 K7ELQ4 463 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-211ENST00000420363 LAD1O00515 517 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 SLITRK3O94933 977 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 VTNP04004 478 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 TOB1P50616 345 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-211ENST00000420363 KCNQ1P51787 676 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 CDC42EP1Q00587 391 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 LARP1BQ659C4 914 aaKnown RBP23.91■■□□□ 1.42
CPNE1-211ENST00000420363 MCTP1Q6DN14 999 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 OTUD6AQ7L8S5 288 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 MYOCDQ8IZQ8 938 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 SNX21Q969T3 373 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 NECAB3Q96P71 396 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-211ENST00000420363 PADI3Q9ULW8 664 aa23.91■■□□□ 1.42
CPNE1-211ENST00000420363 REV3LO60673 3130 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 TTC3P53804 2025 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 GAS2O43903 313 aaKnown RBP23.9■■□□□ 1.42
CPNE1-211ENST00000420363 PDCP20941 246 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 RFC5P40937 340 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 CYP4A11Q02928 519 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 KIZQ2M2Z5 673 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 TMEM266Q2M3C6 531 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 PLA2G4FQ68DD2 849 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 SPRED2Q7Z698 418 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 C4orf32Q8N8J7 132 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 TMEM40Q8WWA1 233 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 SLC7A3Q8WY07 619 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 TOP1MTQ969P6 601 aa23.9■■□□□ 1.42
CPNE1-211ENST00000420363 DHX33Q9H6R0 707 aaKnown RBP23.9■■□□□ 1.42
CPNE1-211ENST00000420363 XIRP2A4UGR9 3374 aa23.89■■□□□ 1.42
CPNE1-211ENST00000420363 BDP1A6H8Y1 2624 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms