RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 VTNP04004 478 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 CA8P35219 290 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 METAP2P50579 478 aaKnown RBP eCLIP17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 KRT17Q04695 432 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 COL9A3Q14050 684 aaPredicted RBP17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 PKN1Q16512 942 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 FAM102BQ5T8I3 360 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 PLPP4Q5VZY2 271 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 TRIM67Q6ZTA4 783 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 SMAP1Q8IYB5 467 aaPredicted RBP17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 PRRX2Q99811 253 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 CDHR5Q9HBB8 845 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 TMEM161AQ9NX61 479 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 PCDHGC5Q9Y5F6 944 aa17.65■□□□□ 0.42
SBDSP1-201ENST00000415772 HMGB1P09429 215 aaKnown RBP17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 FGFR1P11362 822 aa17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 ZNF746Q6NUN9 644 aaPredicted RBP17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 REXO1Q8N1G1 1221 aaKnown RBP17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 RNF169Q8NCN4 708 aa17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 FAM167AQ96KS9 214 aa17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 BRPF3Q9ULD4 1205 aa17.64■□□□□ 0.41
SBDSP1-201ENST00000415772 PLXNA4Q9HCM2 1894 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 LOXHD1Q8IVV2 1947 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 LOC730098B7Z3J9 87 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 C9IYK1 514 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 FAM86B1E9PN63 330 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 MAGEB2O15479 319 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 GLP2RO95838 553 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 FAM86B2P0C5J1 330 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 GNA11P29992 359 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 PPM1AP35813 382 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 BMS1Q14692 1282 aaKnown RBP17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 DUSP6Q16828 381 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 BMP2KLQ5H9B9 411 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 FAM228AQ86W67 206 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 TMEM87AQ8NBN3 555 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 TMEM40Q8WWA1 233 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 ZNF558Q96NG5 402 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 TCF25Q9BQ70 676 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 TMEM117Q9H0C3 514 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 ELAC1Q9H777 363 aaKnown RBP17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 GABBR1Q9UBS5 961 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 PCDHA10Q9Y5I2 948 aa17.63■□□□□ 0.41
SBDSP1-201ENST00000415772 C22orf31O95567 290 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 CYP3A4P08684 503 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 ATF7P17544 494 aaPredicted RBP17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 TECP42680 631 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 CLCN3P51790 818 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 PTPN5P54829 565 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 ZXDAP98168 799 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 PFKFB3Q16875 520 aaPredicted RBP17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 PRR16Q569H4 304 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 LLGL2Q6P1M3 1020 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 TMC7Q7Z402 723 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 BMP8AQ7Z5Y6 402 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 LRRC43Q8N309 656 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 NGRNQ9NPE2 291 aaKnown RBP17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 NRBP2Q9NSY0 501 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 LZTS1Q9Y250 596 aa17.62■□□□□ 0.41
SBDSP1-201ENST00000415772 WDR64B1ANS9 1081 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 CDC27P30260 824 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 RCAN1P53805 252 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 NLRP11P59045 1033 aaKnown RBP17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 ERVFC1P60507 584 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 EXOSC10Q01780 885 aaKnown RBP17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 APOBRQ0VD83 1088 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 FUT2Q10981 343 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 EFCAB12Q6NXP0 572 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 POTEDQ86YR6 584 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 ZNF710Q8N1W2 664 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 CCDC148Q8NFR7 591 aa17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 MAFBQ9Y5Q3 323 aaPredicted RBP17.61■□□□□ 0.41
SBDSP1-201ENST00000415772 IGLV3-22A0A075B6J6 115 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 DHX15O43143 795 aaKnown RBP17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 ADD1P35611 737 aaKnown RBP17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 SIGLEC14Q08ET2 396 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 CBX2Q14781 532 aaPredicted RBP17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 CES5AQ6NT32 575 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 KCNT2Q6UVM3 1135 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 FBXL6Q8N531 539 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 APOL5Q9BWW9 433 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 HCSTQ9UBK5 93 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 NR2E1Q9Y466 385 aa17.6■□□□□ 0.41
SBDSP1-201ENST00000415772 FNDC1Q4ZHG4 1894 aaPredicted RBP17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 ESYT2A0FGR8 921 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 CHMP2AO43633 222 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 GPR32O75388 356 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 ATP4AP20648 1035 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 RBM10P98175 930 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 PLCB3Q01970 1234 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 ADCK5Q3MIX3 580 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 TPRNQ4KMQ1 711 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 ANKRD54Q6NXT1 300 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 LRRC71Q8N4P6 559 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 NLRP7Q8WX94 980 aa17.59■□□□□ 0.41
SBDSP1-201ENST00000415772 ZMYND12Q9H0C1 365 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms