RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 FAM178BQ8IXR5 827 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 LPAR1Q92633 364 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 NACC1Q96RE7 527 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 TSGA10Q9BZW7 698 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 AGO4Q9HCK5 861 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 ARFGAP3Q9NP61 516 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 CNOT7Q9UIV1 285 aaKnown RBP16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 RAB21Q9UL25 225 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 PPP1R9AQ9ULJ8 1098 aa16.64■□□□□ 0.25
SCAMP4-202ENST00000409472 FAM170AA1A519 330 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 RBAK-RBAKDNI3L0D1 243 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 MYO1CO00159 1063 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ATP9AO75110 1047 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 CYP2J2P51589 502 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 TNFAIP1Q13829 316 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 KLHDC7AQ5VTJ3 777 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ZNF720Q7Z2F6 126 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ABCB6Q9NP58 842 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ADAMTS1Q9UHI8 967 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 UBIAD1Q9Y5Z9 338 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 ANO9A1A5B4 782 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 EIF3DO15371 548 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 USO1O60763 962 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 TRIM49P0CI25 452 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 TRIM49CP0CI26 452 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 EPB41P11171 864 aaKnown RBP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 MYCLP12524 364 aaPredicted RBP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 PTK2Q05397 1052 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 EXOC3L4Q17RC7 722 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 RIT2Q99578 217 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 TELO2Q9Y4R8 837 aa16.63■□□□□ 0.25
SCAMP4-202ENST00000409472 DOCK5Q9H7D0 1870 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 ARHGEF35A5YM69 484 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 PJA2O43164 708 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 PSEN1P49768 467 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 MTMR1Q13613 665 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 PGM5Q15124 567 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 ASIC2Q16515 512 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 BEND6Q5SZJ8 279 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 PADI6Q6TGC4 694 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 NSMFQ6X4W1 530 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 TRIM58Q8NG06 486 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 SYN2Q92777 582 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 AGPAT3Q9NRZ7 376 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 SNX12Q9UMY4 172 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 SAMM50Q9Y512 469 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 SLC16A3O15427 465 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 ZMYND10O75800 440 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 KLRC1P26715 233 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 MRPS25P82663 173 aaKnown RBP16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 PCNX4Q63HM2 1172 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 ZNF571Q7Z3V5 609 aaPredicted RBP16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 IRF2BP2Q7Z5L9 587 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 CREG2Q8IUH2 290 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 FAM186BQ8IYM0 893 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 TRPM4Q8TD43 1214 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 AIPL1Q9NZN9 384 aa16.62■□□□□ 0.25
SCAMP4-202ENST00000409472 TACC1O75410 805 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 CCNE2O96020 404 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 BCRP11274 1271 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 GHRHRQ02643 423 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 CBWD6Q4V339 395 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 CBWD3Q5JTY5 395 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 CBWD5Q5RIA9 395 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 C10orf67Q8IYJ2 551 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 ZSWIM2Q8NEG5 633 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 NCAPGQ9BPX3 1015 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
SCAMP4-202ENST00000409472 VWA5AO00534 786 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 PPP1R37O75864 691 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 GUCY2CP25092 1073 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 RPL13P26373 211 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 DNA2P51530 1060 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 BRD3Q15059 726 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 SLC18A3Q16572 532 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 ANGEL2Q5VTE6 544 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 DLK2Q6UY11 383 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 GSPT2Q8IYD1 628 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 CAGE1Q8TC20 777 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 WRNIP1Q96S55 665 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 TLR10Q9BXR5 811 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 PLCB1Q9NQ66 1216 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 JRKLQ9Y4A0 524 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 PHIPQ8WWQ0 1821 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 K7ENM7 598 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 RPS12P25398 132 aaKnown RBP16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 RARRES1P49788 294 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 HMGCS2P54868 508 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 PLA2G4FQ68DD2 849 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 IQCEQ6IPM2 695 aa16.6■□□□□ 0.25
SCAMP4-202ENST00000409472 RDH13Q8NBN7 331 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms