RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 ERCC4Q92889 916 aaPredicted RBP9.91□□□□□ -0.82
GPN1-202ENST00000407583 BAG1Q99933 345 aaPredicted RBP9.91□□□□□ -0.82
GPN1-202ENST00000407583 TEX13BQ9BXU2 312 aa9.91□□□□□ -0.82
GPN1-202ENST00000407583 CNNM2Q9H8M5 875 aa9.91□□□□□ -0.82
GPN1-202ENST00000407583 ZNF446Q9NWS9 450 aa9.91□□□□□ -0.82
GPN1-202ENST00000407583 PPP2R2CQ9Y2T4 447 aa9.91□□□□□ -0.82
GPN1-202ENST00000407583 Q9Y3F1 56 aa9.91□□□□□ -0.82
GPN1-202ENST00000407583 UPP2O95045 317 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 PMLP29590 882 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 LIFRP42702 1097 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 NRIP1P48552 1158 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 METAP2P50579 478 aaKnown RBP eCLIP9.9□□□□□ -0.82
GPN1-202ENST00000407583 MBTPS1Q14703 1052 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 ARID5BQ14865 1188 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 ALX1Q15699 326 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 PTGISQ16647 500 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 TTC39AQ5SRH9 613 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 TAPT1Q6NXT6 567 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 TRIM65Q6PJ69 517 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 KRBA2Q6ZNG9 492 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 EEPD1Q7L9B9 569 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 SIAH1Q8IUQ4 282 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 ANKRD35Q8N283 1001 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 TMTC2Q8N394 836 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
GPN1-202ENST00000407583 IQUBQ8NA54 791 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 CNNM3Q8NE01 707 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 SEC62Q99442 399 aaKnown RBP9.9□□□□□ -0.82
GPN1-202ENST00000407583 VCPKMTQ9H867 229 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.9□□□□□ -0.82
GPN1-202ENST00000407583 NCDNQ9UBB6 729 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 NAP1L2Q9ULW6 460 aaPredicted RBP9.9□□□□□ -0.82
GPN1-202ENST00000407583 MRFAP1Q9Y605 127 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 CLIC4Q9Y696 253 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 MICAL3Q7RTP6 2002 aa9.9□□□□□ -0.82
GPN1-202ENST00000407583 ITIH6Q6UXX5 1313 aa9.9□□□□□ -0.83
GPN1-202ENST00000407583 SCN10AQ9Y5Y9 1956 aa9.9□□□□□ -0.83
GPN1-202ENST00000407583 URI1O94763 535 aaPredicted RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 PARNO95453 639 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 RB1P06400 928 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 ASGR2P07307 311 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 CKBP12277 381 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 BMPR1AP36894 532 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 TXLNAP40222 546 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 USP5P45974 858 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 NT5C2P49902 561 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 DYNLL1P63167 89 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 PPP2R3AQ06190 1150 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 RING1Q06587 406 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 UBE3CQ15386 1083 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 FILIP1LQ4L180 1135 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 VARS2Q5ST30 1063 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 RSRC2Q7L4I2 434 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 RBM23Q86U06 439 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 CNGA4Q8IV77 575 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 REXO1L1PQ8IX06 675 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 SPATA5Q8NB90 893 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 GOLGA5Q8TBA6 731 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 SMARCE1Q969G3 411 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 ALG1Q9BT22 464 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 FOXP1Q9H334 677 aaPredicted RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 LRP2BPQ9P2M1 347 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 LHX6Q9UPM6 363 aa9.89□□□□□ -0.83
GPN1-202ENST00000407583 TRIP12Q14669 1992 aaPredicted RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 HELZ2Q9BYK8 2649 aaKnown RBP9.89□□□□□ -0.83
GPN1-202ENST00000407583 C2CD4DB7Z1M9 353 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 KIF5CO60282 957 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 ZNF18P17022 549 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 XBP1P17861 261 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 DNAJB1P25685 340 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 PLCD1P51178 756 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 CHMP4BP1P59074 171 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 SHC2P98077 582 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 PTPN11Q06124 597 aaPredicted RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 SPAG1Q07617 926 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 RBL2Q08999 1139 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 SART3Q15020 963 aaKnown RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 PTPAQ15257 358 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 IQSEC1Q6DN90 963 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 CC2D1AQ6P1N0 951 aaPredicted RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 TRAF7Q6Q0C0 670 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.88□□□□□ -0.83
GPN1-202ENST00000407583 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 VN1R2Q8NFZ6 395 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 TOP1MTQ969P6 601 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 PPP2R3CQ969Q6 453 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 RTP3Q9BQQ7 232 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 LRRC2Q9BYS8 371 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 NCOA5Q9HCD5 579 aaKnown RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 GPHNQ9NQX3 736 aaPredicted RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 KCNH3Q9ULD8 1083 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 TMX2Q9Y320 296 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 LAMA5O15230 3695 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 DSPP15924 2871 aaKnown RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 VWA3AA6NCI4 1184 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 C1QTNF9BB2RNN3 333 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 TAF4O00268 1085 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 SH2B2O14492 632 aaPredicted RBP9.88□□□□□ -0.83
GPN1-202ENST00000407583 ZBTB43O43298 467 aa9.88□□□□□ -0.83
GPN1-202ENST00000407583 RPS6KA5O75582 802 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms