RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 PUS10Q3MIT2 529 aaKnown RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PLEKHG4Q58EX7 1191 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 EARS2Q5JPH6 523 aaKnown RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PPP2R2DQ66LE6 453 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 MIS18BP1Q6P0N0 1132 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PDXDC2PQ6P474 469 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PLPPR4Q7Z2D5 763 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 GPIHBP1Q8IV16 184 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 USP38Q8NB14 1042 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 DAGLBQ8NCG7 672 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC17A8Q8NDX2 589 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 MAFAQ8NHW3 353 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PPM1EQ8WY54 764 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 GTF3C6Q969F1 213 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PHF20Q9BVI0 1012 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 UNC45AQ9H3U1 944 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 ZNF302Q9NR11 478 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 TBC1D22BQ9NU19 505 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 SAMM50Q9Y512 469 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 PCDHA11Q9Y5I1 949 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 CDY2AQ9Y6F7 541 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 EVPLQ92817 2033 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 MYO7AQ13402 2215 aa6.53□□□□□ -1.36
HMGB1P20-201ENST00000402555 NCOR1O75376 2440 aa6.52□□□□□ -1.36
HMGB1P20-201ENST00000402555 LOXHD1Q8IVV2 1947 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 CCDC194A0A1B0GVG4 234 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ABHD14A-ACY1A0A1B0GW23 586 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 EPOPA6NHQ4 379 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 RRN3P2A6NIE6 340 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZBTB42B2RXF5 422 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 SLC37A4O43826 429 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 GAS7O60861 476 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PARNO95453 639 aaKnown RBP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PSAPP07602 524 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 USP11P51784 963 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 MRPS6P82932 125 aaKnown RBP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 KRT76Q01546 638 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 TAP1Q03518 808 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 MGAT3Q09327 533 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 NR5A1Q13285 461 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 LPIN1Q14693 890 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 NONOQ15233 471 aaKnown RBP eCLIP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 UGCGQ16739 394 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 LETM2Q2VYF4 491 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM26DQ5JW98 314 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 LRCH2Q5VUJ6 765 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 FAM160B1Q5W0V3 765 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZNF746Q6NUN9 644 aaPredicted RBP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 TAF2Q6P1X5 1199 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 MTHFD1LQ6UB35 978 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 LIAT1Q6ZQX7 453 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PIK3AP1Q6ZUJ8 805 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 KRT25Q7Z3Z0 450 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZNF598Q86UK7 904 aaKnown RBP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 CCDC83Q8IWF9 413 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 CKAP2LQ8IYA6 745 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 MYOCDQ8IZQ8 938 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 NSUN7Q8NE18 718 aaKnown RBP6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PHOSPHO2Q8TCD6 241 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ATP8B4Q8TF62 1192 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 NLRP7Q8WX94 980 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 ARNTL2Q8WYA1 636 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 SEPT8Q92599 483 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 SLC5A5Q92911 643 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PPP1R16BQ96T49 567 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 KIF2CQ99661 725 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 TEKT3Q9BXF9 490 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 SLC6A16Q9GZN6 736 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRDM6Q9NQX0 595 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 DISC1Q9NRI5 854 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 GABBR1Q9UBS5 961 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 TCEAL9Q9UHQ7 104 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 MTUS1Q9ULD2 1270 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 PCDHA10Q9Y5I2 948 aa6.52□□□□□ -1.37
HMGB1P20-201ENST00000402555 BDP1A6H8Y1 2624 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 REV3LO60673 3130 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 CYP3A7-CYP3A51PA0A087WV96 503 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 TMEM150BA6NC51 233 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 DDX11L8A8MPP1 907 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 WDR64B1ANS9 1081 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 KIF28PB7ZC32 967 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 ZNF862O60290 1169 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 HBP1O60381 514 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 CAND2O75155 1236 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PSMD10O75832 226 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 UPP2O95045 317 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 GJB5O95377 273 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 AMHP03971 560 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 IGFBP4P22692 258 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 CYP3A7P24462 503 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 KLRC1P26715 233 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 CD52P31358 61 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRR20EP86478 221 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRR20CP86479 221 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRR20DP86480 221 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRR20BP86481 221 aa6.51□□□□□ -1.37
HMGB1P20-201ENST00000402555 PRR20AP86496 221 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms