RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CMPK2Q5EBM0 449 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 FSCBQ5H9T9 825 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 APOA5Q6Q788 366 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PALM2Q8IXS6 379 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 CYTH2Q99418 400 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 COPRSQ9NQ92 184 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PFDN4Q9NQP4 134 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TXNDC16Q9P2K2 825 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 STK17AQ9UEE5 414 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 AP4S1Q9Y587 144 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TET3O43151 1660 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 SPHKAPQ2M3C7 1700 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 SH2B2O14492 632 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 FGGP02679 453 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 XRCC5P13010 732 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 CA8P35219 290 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TNIP1Q15025 636 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 DCAF17Q5H9S7 520 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 WDR75Q8IWA0 830 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ALKBH8Q96BT7 664 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ACSBG1Q96GR2 724 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ABHD8Q96I13 439 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PLGRKTQ9HBL7 147 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TTLL1O95922 423 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 LIFRP42702 1097 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PSMC1P62191 440 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 RASGRF1Q13972 1273 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TRMT5Q32P41 509 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ERMARDQ5T6L9 678 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 LRRC74BQ6ZQY2 392 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 CYFIP1Q7L576 1253 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ZBTB8BQ8NAP8 495 aaPredicted RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 TRIM15Q9C019 465 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 WWP1Q9H0M0 922 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 RANBP17Q9H2T7 1088 aaKnown RBP10.69□□□□□ -0.7
PTPRM-203ENST00000400060 ATP11BQ9Y2G3 1177 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 COL4A3BPQ9Y5P4 624 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 PCDH11XQ9BZA7 1347 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 FRMPD1Q5SYB0 1578 aa10.69□□□□□ -0.7
PTPRM-203ENST00000400060 CDH16O75309 829 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 DRD4P21917 467 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 NAPAP54920 295 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF268Q14587 947 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 HEATR3Q7Z4Q2 680 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 CXorf38Q8TB03 319 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 SUCLG2Q96I99 432 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 OSBPL8Q9BZF1 889 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 DNAI2Q9GZS0 605 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 PCDHGC5Q9Y5F6 944 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ARAP3Q8WWN8 1544 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 C5orf60A6NFR6 353 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 RSPH10B2B2RC85 870 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 EYA2O00167 538 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 CAPN9O14815 690 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 COQ9O75208 318 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 LCA5LO95447 670 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 RSPH10BP0C881 870 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 NT5C2P49902 561 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 AMPD2Q01433 879 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 KIAA1755Q5JYT7 1200 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF444Q8N0Y2 327 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 UHMK1Q8TAS1 419 aaKnown RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 RSPH1Q8WYR4 309 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 TRIM11Q96F44 468 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 METTL22Q9BUU2 404 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 FAM47DPA6NHR8 397 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 WDR46O15213 610 aaKnown RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 DAPK3O43293 454 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 EXOC3O60645 756 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 PAEPP09466 180 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 NAB2Q15742 525 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 KLHL38Q2WGJ6 581 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 NT5DC1Q5TFE4 455 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 SNX30Q5VWJ9 437 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 KRT39Q6A163 491 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 GRAMD1CQ8IYS0 662 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ACTRT1Q8TDG2 376 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 VPS50Q96JG6 964 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 CD209Q9NNX6 404 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 UBAP1Q9NZ09 502 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 SALL3Q9BXA9 1300 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 UGGT1Q9NYU2 1555 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 KPNA4O00629 521 aaPredicted RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 DTNBO60941 627 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 GFAPP14136 432 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF76P36508 570 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 CDKAL1Q5VV42 579 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ZNF790Q6PG37 636 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 NLRP9Q7RTR0 991 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 CRLF3Q8IUI8 442 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 GLT8D2Q9H1C3 349 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 TBCCD1Q9NVR7 557 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 DBNLQ9UJU6 430 aaKnown RBP10.68□□□□□ -0.7
PTPRM-203ENST00000400060 ABCB11O95342 1321 aa10.68□□□□□ -0.7
PTPRM-203ENST00000400060 OVOS2A0A0G2JMS6 1433 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 PFASO15067 1338 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 GOLGA8TH3BQL2 631 aa10.67□□□□□ -0.7
PTPRM-203ENST00000400060 NCK2O43639 380 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms