RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 DYDC1Q8WWB3 177 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 CCDC114Q96M63 670 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 MEIS2O14770 477 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 LONRF2Q1L5Z9 754 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 Q4G0T1 1027 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 CENPPQ6IPU0 288 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 CCDC155Q8N6L0 562 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 FAM213AQ9BRX8 229 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 MSTO1Q9BUK6 570 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 LAMB4A4D0S4 1761 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 ZMYND10O75800 440 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 VAMP7P51809 220 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 MESDQ14696 234 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 NAA35Q5VZE5 725 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 PAF1Q8N7H5 531 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 KIAA0895Q8NCT3 520 aa15.24■□□□□ 0.03
SCAF4-202ENST00000399804 TLDC2A0PJX2 215 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 H0YHG0 523 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 KRIT1O00522 736 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 SNHG28P0DPA3 235 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 CALCOCO2Q13137 446 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 NPY5RQ15761 445 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 SYTL5Q8TDW5 730 aaPredicted RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 HAS1Q92839 578 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 ST7Q9NRC1 585 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 EIF3CLB5ME19 914 aaKnown RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 SRGAP2O75044 1071 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 FASTKD5Q7L8L6 764 aaKnown RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 EIF3CQ99613 913 aaKnown RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 DDX41Q9UJV9 622 aaKnown RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 PCDHB4Q9Y5E5 795 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 NHSL1Q5SYE7 1610 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 IQCA1LA6NCM1 817 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 ACTN1P12814 892 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 CNGA1P29973 690 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 MMP14P50281 582 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 C2orf69Q8N8R5 385 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 POLR3FQ9H1D9 316 aaPredicted RBP15.23■□□□□ 0.03
SCAF4-202ENST00000399804 PRM3Q9NNZ6 103 aa15.23■□□□□ 0.03
SCAF4-202ENST00000399804 MARF1Q9Y4F3 1742 aaKnown RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 PPP1R11O60927 126 aaPredicted RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 GIT2Q14161 759 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 THNSL1Q8IYQ7 743 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 C4orf32Q8N8J7 132 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 EDEM3Q9BZQ6 932 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 NEBLO76041 1014 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 NSFP46459 744 aaKnown RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 DRAP1Q14919 205 aaPredicted RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 C9orf131Q5VYM1 1079 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 MMP19Q99542 508 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 DNAJC18Q9H819 358 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 UTP11Q9Y3A2 253 aaKnown RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 GGPS1O95749 300 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 SLC9A1P19634 815 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 MMS19Q96T76 1030 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 MTRQ99707 1265 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 PARD6BQ9BYG5 372 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 MTRF1LQ9UGC7 380 aaKnown RBP15.22■□□□□ 0.03
SCAF4-202ENST00000399804 EMSYQ7Z589 1322 aa15.22■□□□□ 0.03
SCAF4-202ENST00000399804 ADAMTS3O15072 1205 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 CLDN3O15551 220 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 STAT5BP51692 787 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 BPIFB4P59827 614 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 LLGL1Q15334 1064 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 ANKRD13AQ8IZ07 590 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 UBLCP1Q8WVY7 318 aaPredicted RBP15.21■□□□□ 0.03
SCAF4-202ENST00000399804 NID2Q14112 1375 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 NUP98P52948 1817 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 SMIM23A6NLE4 172 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 SEC31AO94979 1220 aaKnown RBP15.21■□□□□ 0.03
SCAF4-202ENST00000399804 MYZAPP0CAP1 466 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 ABCD1P33897 745 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 XKR3Q5GH77 459 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 ERGIC2Q96RQ1 377 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 FAM107BQ9H098 131 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 KCND2Q9NZV8 630 aa15.21■□□□□ 0.03
SCAF4-202ENST00000399804 DGAT1O75907 488 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 KIAA0754O94854 1291 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 PAK2Q13177 524 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 SLFN12LQ6IEE8 588 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 CCDC105Q8IYK2 499 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 ZNF653Q96CK0 615 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 MOV10L1Q9BXT6 1211 aaKnown RBP15.21■□□□□ 0.02
SCAF4-202ENST00000399804 HDAC6Q9UBN7 1215 aa15.21■□□□□ 0.02
SCAF4-202ENST00000399804 NXF1Q9UBU9 619 aaKnown RBP15.21■□□□□ 0.02
SCAF4-202ENST00000399804 EML1O00423 815 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 MAFGO15525 162 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 LACTBP83111 547 aaPredicted RBP15.2■□□□□ 0.02
SCAF4-202ENST00000399804 EXOC8Q8IYI6 725 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 SCFD1Q8WVM8 642 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 PSPC1Q8WXF1 523 aaKnown RBP15.2■□□□□ 0.02
SCAF4-202ENST00000399804 TMEM143Q96AN5 459 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 FAM167AQ96KS9 214 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 ADARB2Q9NS39 739 aaKnown RBP15.2■□□□□ 0.02
SCAF4-202ENST00000399804 TRIM10Q9UDY6 481 aa15.2■□□□□ 0.02
SCAF4-202ENST00000399804 GBP2P32456 591 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms