RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 SYCP3Q8IZU3 236 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 LRRC57Q8N9N7 239 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 SLC12A6Q9UHW9 1150 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 SRRM3A6NNA2 597 aaPredicted RBP15.97■□□□□ 0.15
CCNF-202ENST00000397066 HGSO14964 777 aaPredicted RBP15.97■□□□□ 0.15
CCNF-202ENST00000397066 LRRN2O75325 713 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 TRIM37O94972 964 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 HS2ST1Q7LGA3 356 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 CNBD1Q8NA66 436 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 RBM46Q8TBY0 533 aaKnown RBP15.97■□□□□ 0.15
CCNF-202ENST00000397066 PAGR1Q9BTK6 254 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 RIMBP2O15034 1052 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 PSMC6P62333 389 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 GRAPQ13588 217 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 PPP1R18Q6NYC8 613 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 TBC1D1Q86TI0 1168 aaPredicted RBP15.97■□□□□ 0.15
CCNF-202ENST00000397066 NT5DC3Q86UY8 548 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
CCNF-202ENST00000397066 TMOD4Q9NZQ9 345 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 DNAJC12Q9UKB3 198 aa15.97■□□□□ 0.15
CCNF-202ENST00000397066 GPR75-ASB3A0A0A6YYF3 556 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 H0YGN5 161 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 DDX3XO00571 662 aaKnown RBP eCLIP15.96■□□□□ 0.154e-14■■■□□ 15.5
CCNF-202ENST00000397066 GTF2IP78347 998 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 GPATCH4Q5T3I0 446 aaKnown RBP15.96■□□□□ 0.15
CCNF-202ENST00000397066 EMC10Q5UCC4 262 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 FOXR2Q6PJQ5 311 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 CCDC105Q8IYK2 499 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 FRMD4BQ9Y2L6 1034 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 PTPN22Q9Y2R2 807 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 NFS1Q9Y697 457 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 BTNL10A8MVZ5 291 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 PDXKO00764 312 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 HLA-DOAP06340 250 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 ECHS1P30084 290 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 MARSP56192 900 aaKnown RBP15.96■□□□□ 0.15
CCNF-202ENST00000397066 PPP2R5EQ16537 467 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 CATSPER3Q86XQ3 398 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 UBL4BQ8N7F7 174 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 STMN4Q9H169 189 aaPredicted RBP15.96■□□□□ 0.15
CCNF-202ENST00000397066 KCNK9Q9NPC2 374 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 TYW1Q9NV66 732 aaKnown RBP15.96■□□□□ 0.15
CCNF-202ENST00000397066 ITGB4P16144 1822 aa15.96■□□□□ 0.15
CCNF-202ENST00000397066 ELF1P32519 619 aa15.96■□□□□ 0.14
CCNF-202ENST00000397066 SNAP25P60880 206 aa15.96■□□□□ 0.14
CCNF-202ENST00000397066 DRAP1Q14919 205 aaPredicted RBP15.96■□□□□ 0.14
CCNF-202ENST00000397066 LLGL1Q15334 1064 aa15.96■□□□□ 0.14
CCNF-202ENST00000397066 RFFLQ8WZ73 363 aa15.96■□□□□ 0.14
CCNF-202ENST00000397066 TATDN2Q93075 761 aa15.96■□□□□ 0.14
CCNF-202ENST00000397066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.96■□□□□ 0.141e-6■■■■■ 114.5
CCNF-202ENST00000397066 RSPH10B2B2RC85 870 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 RASSF9O75901 435 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 RSPH10BP0C881 870 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 GSCP56915 257 aaPredicted RBP15.95■□□□□ 0.14
CCNF-202ENST00000397066 BYSLQ13895 437 aaKnown RBP15.95■□□□□ 0.14
CCNF-202ENST00000397066 SEL1L2Q5TEA6 688 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 PPP1R9AQ9ULJ8 1098 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 PSMC2P35998 433 aaKnown RBP15.95■□□□□ 0.14
CCNF-202ENST00000397066 C6orf89Q6UWU4 347 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 TPH2Q8IWU9 490 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 ERP44Q9BS26 406 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 SERPINB13Q9UIV8 391 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 RABGAP1Q9Y3P9 1069 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 GIT2Q14161 759 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 PRMT1Q99873 361 aaKnown RBP15.95■□□□□ 0.14
CCNF-202ENST00000397066 GLT8D2Q9H1C3 349 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 TPX2Q9ULW0 747 aaKnown RBP15.95■□□□□ 0.14
CCNF-202ENST00000397066 TAF1P21675 1872 aa15.95■□□□□ 0.14
CCNF-202ENST00000397066 OPLAHO14841 1288 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 SOX5P35711 763 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 PIGOQ8TEQ8 1089 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 GGT7Q9UJ14 662 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 A0A1B0GUL6 1792 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 COL4A1P02462 1669 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 A0A1B0GUA9 196 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 CCT8L1PA6NM43 557 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 SHBGP04278 402 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 EPHA7Q15375 998 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 CCDC38Q502W7 563 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 KIAA1755Q5JYT7 1200 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 RSRC1Q96IZ7 334 aaKnown RBP15.94■□□□□ 0.14
CCNF-202ENST00000397066 SUFUQ9UMX1 484 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 PITPNM2Q9BZ72 1349 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 GPSM2P81274 684 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 CALCOCO2Q13137 446 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 SLC29A2Q14542 456 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 QRICH1Q2TAL8 776 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 ARSHQ5FYA8 562 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 NR2E1Q9Y466 385 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 SHANK3Q9BYB0 1731 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 PPP1R11O60927 126 aaPredicted RBP15.94■□□□□ 0.14
CCNF-202ENST00000397066 ECM2O94769 699 aaPredicted RBP15.94■□□□□ 0.14
CCNF-202ENST00000397066 MESDQ14696 234 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 TAOK1Q7L7X3 1001 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 JAMLQ86YT9 394 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 P3H4Q92791 437 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 MXD3Q9BW11 206 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 USP40Q9NVE5 1235 aa15.94■□□□□ 0.14
CCNF-202ENST00000397066 BCS1LQ9Y276 419 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 300.8 ms