RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 PPP1R9AQ9ULJ8 1098 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 PABPN1LA6NDY0 278 aaKnown RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 NFIBO00712 420 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 ZNF500O60304 480 aaPredicted RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 MFAP3LO75121 409 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 KIF11P52732 1056 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 ZNF667Q5HYK9 610 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 ALKBH5Q6P6C2 394 aaKnown RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 RSRC2Q7L4I2 434 aaKnown RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 ZFYVE28Q9HCC9 887 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 KCNK9Q9NPC2 374 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 PRKAG2Q9UGJ0 569 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 NALCNQ8IZF0 1738 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 VIL1P09327 827 aaKnown RBP14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 KCNB1Q14721 858 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 SARM1Q6SZW1 724 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 HDXQ7Z353 690 aa14.2□□□□□ -0.14
PTPRN2-202ENST00000389416 DGAT1O75907 488 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 STK10O94804 968 aaKnown RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 PKN1Q16512 942 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 TAB3Q8N5C8 712 aaPredicted RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 CCDC89Q8N998 374 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 RIT2Q99578 217 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 RIOX1Q9H6W3 641 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 DDX41Q9UJV9 622 aaKnown RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 SSX2IPQ9Y2D8 614 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 PGK2P07205 417 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 EVX2Q03828 476 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 MYRIPQ8NFW9 859 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 HEXIM2Q96MH2 286 aaKnown RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 TOPORSQ9NS56 1045 aaPredicted RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 GAKO14976 1311 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 PFASO15067 1338 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 MSH4O15457 936 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 SERPING1P05155 500 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 MAPK4P31152 587 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 VAMP7P51809 220 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 BFSP1Q12934 665 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 SND1Q7KZF4 910 aaKnown RBP eCLIP14.19□□□□□ -0.142e-6■■■■□ 20.8
PTPRN2-202ENST00000389416 XRN1Q8IZH2 1706 aaKnown RBP14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 OR6B3Q8NGW1 331 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 SCFD2Q8WU76 684 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 VPS18Q9P253 973 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 ANKRD26Q9UPS8 1709 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 PEAK1Q9H792 1746 aa14.19□□□□□ -0.14
PTPRN2-202ENST00000389416 RPA1P27694 616 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 TOB1P50616 345 aaPredicted RBP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 METTL23Q86XA0 190 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 VPS33BQ9H267 617 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 KIAA1586Q9HCI6 787 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 FTCDO95954 541 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 CXCR5P32302 372 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 WHAMMP3Q1A5X7 153 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 LMBRD2Q68DH5 695 aaPredicted RBP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 DSTYKQ6XUX3 929 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 FEZ2Q9UHY8 353 aaPredicted RBP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 PRKCEQ02156 737 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 FMR1Q06787 632 aaKnown RBP eCLIP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 DPYDQ12882 1025 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 PTPAQ15257 358 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 TRIM50Q86XT4 487 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 FAM81BQ96LP2 452 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 MRPL4Q9BYD3 311 aaKnown RBP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 C2orf40Q9H1Z8 148 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 RRAGCQ9HB90 399 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 CASC4Q6P4E1 433 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 CATSPER3Q86XQ3 398 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 CCDC170Q8IYT3 715 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 DAGLBQ8NCG7 672 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 GMCL1P1Q8NEA9 526 aa14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
PTPRN2-202ENST00000389416 MMP14P50281 582 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 DHX40Q8IX18 779 aaKnown RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 MAIP1Q8WWC4 291 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 OPTNQ96CV9 577 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 PANX2Q96RD6 677 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 GTF2A2P52657 109 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 ST3GAL1Q11201 340 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 PPFIA1Q13136 1202 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 PAK2Q13177 524 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 CCDC14Q49A88 953 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 BPIFA3Q9BQP9 254 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 SMARCAD1Q9H4L7 1026 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 LRRC4Q9HBW1 653 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 AGO2Q9UKV8 859 aaKnown RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 LRRC53A6NM62 1247 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 MOCS3O95396 460 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 ARP10275 920 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 OR6B2Q6IFH4 312 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 RSAD2Q8WXG1 361 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 C7orf25Q9BPX7 421 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 GCOM2Q9BZD3 368 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 DPH5Q9H2P9 285 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 SUCLA2Q9P2R7 463 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 MAFGO15525 162 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 ATP2C2O75185 946 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 GH1P01241 217 aa14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 HPDP32754 393 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 ZC2HC1CQ53FD0 456 aaPredicted RBP14.17□□□□□ -0.14
PTPRN2-202ENST00000389416 SLC30A10Q6XR72 485 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms