RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 MED14O60244 1454 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 IFNA8P32881 189 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 TOB2Q14106 344 aaPredicted RBP10.24□□□□□ -0.77
SNX1-202ENST00000380285 PRPF38AQ8NAV1 312 aaKnown RBP10.24□□□□□ -0.77
SNX1-202ENST00000380285 JAK3P52333 1124 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 ARFIP2P53365 341 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 GTF2IP78347 998 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 NAALADL2Q58DX5 795 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 TRMT10CQ7L0Y3 403 aaKnown RBP10.24□□□□□ -0.77
SNX1-202ENST00000380285 GUF1Q8N442 669 aaKnown RBP10.24□□□□□ -0.77
SNX1-202ENST00000380285 UGGT1Q9NYU2 1555 aa10.24□□□□□ -0.77
SNX1-202ENST00000380285 AP3B1O00203 1094 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 MDH1P40925 334 aaKnown RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 COPS2P61201 443 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 DNAL1Q4LDG9 190 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 LRRC8BQ6P9F7 803 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 FAM160B2Q86V87 743 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 PGBD1Q96JS3 809 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 KIF2CQ99661 725 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 WWP1Q9H0M0 922 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 SYCE1LA8MT33 242 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 CASP2P42575 452 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ALX1Q15699 326 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 CFAP36Q96G28 342 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ETNK1Q9HBU6 452 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ANLNQ9NQW6 1124 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 L3MBTL1Q9Y468 752 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 NVLO15381 856 aaKnown RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 AP1B1Q10567 949 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 TMCO4Q5TGY1 634 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 RASGRP2Q7LDG7 609 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 SIRT2Q8IXJ6 389 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 EIF3DO15371 548 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNX1-202ENST00000380285 GOLGA8HP0CJ92 632 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ADORA1P30542 326 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 KLC1Q07866 573 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 CCNYQ8ND76 341 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 CSADQ9Y600 493 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 USP6P35125 1406 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 QRICH2Q9H0J4 1663 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 E9PMD0 336 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 PFKFB3Q16875 520 aaPredicted RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 TRIM67Q6ZTA4 783 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 METTL23Q86XA0 190 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 RIBC1Q8N443 379 aaPredicted RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 FAF2Q96CS3 445 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 MAGEB5Q9BZ81 275 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNX1-202ENST00000380285 GREM2Q9H772 168 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ASNSD1Q9NWL6 643 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 CLEC11AQ9Y240 323 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ZBTB12Q9Y330 459 aaPredicted RBP10.23□□□□□ -0.77
SNX1-202ENST00000380285 SMAPO00193 183 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 BRAFP15056 766 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 SLC1A1P43005 524 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 ERICH1Q86X53 443 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 GINM1Q9NU53 330 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 TEKT2Q9UIF3 430 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 PSAPP07602 524 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 KRT16P08779 473 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 PSMA2P25787 234 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 TRADDQ15628 312 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 DAB2IPQ5VWQ8 1189 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 SPATA4Q8NEY3 305 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 RFFLQ8WZ73 363 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
SNX1-202ENST00000380285 LRRC53A6NM62 1247 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 LRRC41Q15345 812 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 OSBP2Q969R2 916 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 ANKRD27Q96NW4 1050 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 NCKAP5LQ9HCH0 1330 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 TMEM247A6NEH6 219 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 SPDYE16A6NNV3 312 aaPredicted RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 RAD23BP54727 409 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 MRPS35P82673 323 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 SPDYE2Q495Y8 402 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 TMEM35BQ8NCS4 154 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 OR9Q1Q8NGQ5 310 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 C8orf37Q96NL8 207 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 IP6K2Q9UHH9 426 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 ANAPC7Q9UJX3 599 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 CPSF3Q9UKF6 684 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 SNX12Q9UMY4 172 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 LPXNO60711 386 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 ESRRBO95718 433 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 DCAF4Q8WV16 495 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 TTC17Q96AE7 1141 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 SGSM3Q96HU1 749 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 CHAMP1Q96JM3 812 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 FAM20AQ96MK3 541 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 HINFPQ9BQA5 517 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 DNAJC17Q9NVM6 304 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 TLR7Q9NYK1 1049 aaKnown RBP10.22□□□□□ -0.77
SNX1-202ENST00000380285 LARGE1O95461 756 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 IL1RL1Q01638 556 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 POTEAQ6S8J7 498 aa10.22□□□□□ -0.77
SNX1-202ENST00000380285 FRMD5Q7Z6J6 570 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms