RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 ETNPPLQ8TBG4 499 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 PPP2R3CQ969Q6 453 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 NIFKQ9BYG3 293 aaKnown RBP21.26■□□□□ 0.99
TMEM53-201ENST00000372235 NSUN3Q9H649 340 aaKnown RBP21.26■□□□□ 0.99
TMEM53-201ENST00000372235 AAASQ9NRG9 546 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 ST3GAL5Q9UNP4 418 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 KCNJ14Q9UNX9 436 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 NOC2LQ9Y3T9 749 aaKnown RBP21.26■□□□□ 0.99
TMEM53-201ENST00000372235 PPME1Q9Y570 386 aa21.26■□□□□ 0.99
TMEM53-201ENST00000372235 BAG4O95429 457 aaKnown RBP21.25■□□□□ 0.99
TMEM53-201ENST00000372235 ZSCAN20P17040 1043 aaPredicted RBP21.25■□□□□ 0.99
TMEM53-201ENST00000372235 TFF2Q03403 129 aa21.25■□□□□ 0.99
TMEM53-201ENST00000372235 TRIM29Q14134 588 aa21.25■□□□□ 0.99
TMEM53-201ENST00000372235 KIZQ2M2Z5 673 aa21.25■□□□□ 0.99
TMEM53-201ENST00000372235 RTN4RL1Q86UN2 441 aaPredicted RBP21.25■□□□□ 0.99
TMEM53-201ENST00000372235 AIFM3Q96NN9 605 aa21.25■□□□□ 0.99
TMEM53-201ENST00000372235 ELAC1Q9H777 363 aaKnown RBP21.25■□□□□ 0.99
TMEM53-201ENST00000372235 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.24■□□□□ 0.99
TMEM53-201ENST00000372235 HOXA2O43364 376 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 ZNF862O60290 1169 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 GPR32O75388 356 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 NEK4P51957 841 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 PSMC5P62195 406 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 PPP2R5CQ13362 524 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 CSPP1Q1MSJ5 1256 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 TMEM266Q2M3C6 531 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 B3GNT9Q6UX72 402 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 SLFN12Q8IYM2 578 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 LINC01599Q8WXQ3 324 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 GTF3C6Q969F1 213 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 OSMRQ99650 979 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 ADAM2Q99965 735 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 TMX1Q9H3N1 280 aa21.24■□□□□ 0.99
TMEM53-201ENST00000372235 UBE2ZQ9H832 354 aaPredicted RBP21.24■□□□□ 0.99
TMEM53-201ENST00000372235 CCNT1O60563 726 aaKnown RBP21.23■□□□□ 0.99
TMEM53-201ENST00000372235 VTNP04004 478 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 EIF4BP23588 611 aaKnown RBP21.23■□□□□ 0.99
TMEM53-201ENST00000372235 KRT2P35908 639 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 NLRP11P59045 1033 aaKnown RBP21.23■□□□□ 0.99
TMEM53-201ENST00000372235 LINC01465Q8N7H1 131 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 RSPH1Q8WYR4 309 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 SCLT1Q96NL6 688 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 INO80BQ9C086 356 aaPredicted RBP21.23■□□□□ 0.99
TMEM53-201ENST00000372235 TMEM161AQ9NX61 479 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 SEPT9Q9UHD8 586 aaPredicted RBP21.23■□□□□ 0.99
TMEM53-201ENST00000372235 FAM50BQ9Y247 325 aa21.23■□□□□ 0.99
TMEM53-201ENST00000372235 CLCN3P51790 818 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 TARBP2Q15633 366 aaKnown RBP21.22■□□□□ 0.99
TMEM53-201ENST00000372235 LEXMQ3ZCV2 418 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 PIK3AP1Q6ZUJ8 805 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 TMEM40Q8WWA1 233 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 CDHR5Q9HBB8 845 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 ATP6V0A4Q9HBG4 840 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 KCNMB3Q9NPA1 279 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 PCDHB12Q9Y5F1 795 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 NLRC5Q86WI3 1866 aa21.22■□□□□ 0.99
TMEM53-201ENST00000372235 C9IYK1 514 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 MMP1P03956 469 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 P4HBP07237 508 aaKnown RBP21.21■□□□□ 0.99
TMEM53-201ENST00000372235 QARSP47897 775 aaKnown RBP21.21■□□□□ 0.99
TMEM53-201ENST00000372235 KCNQ1P51787 676 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 FAM189BP81408 668 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 ME3Q16798 604 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 FAM228AQ86W67 206 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 NLRP7Q8WX94 980 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 PABPC5Q96DU9 382 aaKnown RBP21.21■□□□□ 0.99
TMEM53-201ENST00000372235 GCOM2Q9BZD3 368 aaPredicted RBP21.21■□□□□ 0.99
TMEM53-201ENST00000372235 ADAMTS10Q9H324 1103 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 DACT1Q9NYF0 836 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 TRANK1O15050 2925 aa21.21■□□□□ 0.99
TMEM53-201ENST00000372235 CTDNEP1O95476 244 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 LINC00271P0C7V0 271 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 GPC3P51654 580 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 UGCGQ16739 394 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 MTERF2Q49AM1 385 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 OTUD6AQ7L8S5 288 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 LRRC71Q8N4P6 559 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 CHST12Q9NRB3 414 aa21.2■□□□□ 0.98
TMEM53-201ENST00000372235 MRPL42Q9Y6G3 142 aaKnown RBP21.2■□□□□ 0.98
TMEM53-201ENST00000372235 EVPLQ92817 2033 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 FSD2A1L4K1 749 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 CARNS1A5YM72 827 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 DDX11L8A8MPP1 907 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 SLC37A4O43826 429 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 GAS2O43903 313 aaKnown RBP21.19■□□□□ 0.98
TMEM53-201ENST00000372235 DARSP14868 501 aaKnown RBP21.19■□□□□ 0.98
TMEM53-201ENST00000372235 UBE3AQ05086 875 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 TCEAL5Q5H9L2 206 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 SPOUT1Q5T280 376 aaKnown RBP21.19■□□□□ 0.98
TMEM53-201ENST00000372235 ZNF410Q86VK4 478 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 SLC7A3Q8WY07 619 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 PLAGL2Q9UPG8 496 aa21.19■□□□□ 0.98
TMEM53-201ENST00000372235 LOXHD1Q8IVV2 1947 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 IGKV6-21A0A0C4DH24 114 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 MGEA5O60502 916 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 MAFO75444 373 aaPredicted RBP21.18■□□□□ 0.98
TMEM53-201ENST00000372235 SKIP12755 728 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 KCNA5P22460 613 aa21.18■□□□□ 0.98
TMEM53-201ENST00000372235 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
TMEM53-201ENST00000372235 EPHA7Q15375 998 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms