RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 CALML3P27482 149 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 PPATQ06203 517 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 DIXDC1Q155Q3 683 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SLC4A8Q2Y0W8 1093 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 AP1ARQ63HQ0 302 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SUPT20HQ8NEM7 779 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SLC30A5Q8TAD4 765 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 C18orf8Q96DM3 657 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 ERP44Q9BS26 406 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 SYT11Q9BT88 431 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 ZMYND12Q9H0C1 365 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 DCP1AQ9NPI6 582 aaPredicted RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 COG5Q9UP83 839 aa12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
SMARCA1-201ENST00000371121 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 TCP11X1B4DZS4 312 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 GYG1P46976 350 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 EIF3BP55884 814 aaKnown RBP12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 RWDD2BP57060 319 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 LETM2Q2VYF4 491 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 ANKS4BQ8N8V4 417 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 BCAS3Q9H6U6 928 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 INTS9Q9NV88 658 aaKnown RBP12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 TMEM260Q9NX78 707 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 CCDC194A0A1B0GVG4 234 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 TPBGLP0DKB5 382 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 CASP5P51878 434 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 FOXR2Q6PJQ5 311 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 OCEL1Q9H607 264 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 MLXIPLQ9NP71 852 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
SMARCA1-201ENST00000371121 NPHP3-ACAD11A0A0J9YXS1 232 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 GNAT1P11488 350 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 CETPP11597 493 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TMEM119Q4V9L6 283 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 SCFD1Q8WVM8 642 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 LARP4BQ92615 738 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 RAB17Q9H0T7 212 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 RIPK2O43353 540 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 VCAM1P19320 739 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 ZNF131P52739 623 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 PALB2Q86YC2 1186 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 UCMAQ8WVF2 138 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 RAD54LQ92698 747 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TMEM109Q9BVC6 243 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 GPR88Q9GZN0 384 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 PCMTD2Q9NV79 361 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 SNX24Q9Y343 169 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 PFASO15067 1338 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 NHSQ6T4R5 1651 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TCRBV7S2A1N4TA0A589 114 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 VIMP08670 466 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 UCHL3P15374 230 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 KLRK1P26718 216 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 PAPOLAP51003 745 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 COASYQ13057 564 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 GRM4Q14833 912 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 RNF220Q5VTB9 566 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 NUGGCQ68CJ6 796 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 ZNF34Q8IZ26 560 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TMEM237Q96Q45 408 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 DDX23Q9BUQ8 820 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TANGO6Q9C0B7 1094 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 PAPOLBQ9NRJ5 636 aaKnown RBP12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 FAM114A2Q9NRY5 505 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 ABCF2Q9UG63 623 aa12.66□□□□□ -0.38
SMARCA1-201ENST00000371121 TLDC2A0PJX2 215 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 USP17L3A6NCW0 530 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 USP17L4A6NCW7 530 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 GOLGA8HP0CJ92 632 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 RASA1P20936 1047 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 MARCKSL1P49006 195 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PLTPP55058 493 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 ZNF211Q13398 564 aaPredicted RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 ALKBH5Q6P6C2 394 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 MTHFD1LQ6UB35 978 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 USP17L1Q7RTZ2 530 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 COL23A1Q86Y22 540 aaPredicted RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 KLHL29Q96CT2 875 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 SLC7A6OSQ96CW6 309 aaPredicted RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 SBF2Q86WG5 1849 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 AFPP02771 609 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PYGLP06737 847 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PON1P27169 355 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PPP1R2P41236 205 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 PRKCIP41743 596 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 SLMAPQ14BN4 828 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 IFI16Q16666 785 aaKnown RBP12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 GNPTABQ3T906 1256 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 HEATR3Q7Z4Q2 680 aa12.65□□□□□ -0.38
SMARCA1-201ENST00000371121 JAMLQ86YT9 394 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms