RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 DEFB115Q30KQ5 88 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 RGL3Q3MIN7 710 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 GTF2IRD2BQ6EKJ0 949 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 GTF2IRD2Q86UP8 949 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 COPS5Q92905 334 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 OSBP2Q969R2 916 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 PPP1R14AQ96A00 147 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 NKX2-4Q9H2Z4 354 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 FAM53CQ9NYF3 392 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 ACSL6Q9UKU0 697 aa6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 MRPS23Q9Y3D9 190 aaKnown RBP6.1□□□□□ -1.43
ECHDC1-204ENST00000368292 TRBV23-1A0A0A0MS06 115 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CCDC163A0A0D9SF12 145 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 LRRC10BA6NIK2 292 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 NOP56O00567 594 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 TIMM44O43615 452 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 FGFR1P11362 822 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 AMPD3Q01432 767 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 MESP2Q0VG99 397 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 MLANAQ16655 118 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 MAP9Q49MG5 647 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CCDC184Q52MB2 194 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 HLA-DQA1Q5Y7H0 255 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 EEF1DP3Q658K8 133 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 GALNT18Q6P9A2 607 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 POMZP3Q6PJE2 187 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CYP2R1Q6VVX0 501 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 EGFL6Q8IUX8 553 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 DRC7Q8IY82 874 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CRACR2BQ8N4Y2 399 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 POU5F2Q8N7G0 328 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 NAT16Q8N8M0 369 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 BTN2A2Q8WVV5 523 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 INTS4Q96HW7 963 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CLUHP3Q96NS8 147 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CDC5LQ99459 802 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 ZHX3Q9H4I2 956 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 KCNK12Q9HB15 430 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 NCOA5Q9HCD5 579 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CRTAC1Q9NQ79 661 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CYP26B1Q9NR63 512 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 CTDP1Q9Y5B0 961 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 BACE2Q9Y5Z0 518 aa6.09□□□□□ -1.43
ECHDC1-204ENST00000368292 USP47Q96K76 1375 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 TCERG1O14776 1098 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 PRODHO43272 600 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 RFPL3O75679 317 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 LDHAP00338 332 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 VIL1P09327 827 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 MSL3P1P0C860 447 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 PABPC1P11940 636 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 PNLIPP16233 465 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 IRX3P78415 501 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 MVKQ03426 396 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 SCRN1Q12765 414 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 PABPC4Q13310 644 aaKnown RBP eCLIP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 SF1Q15637 639 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 TBC1D10BQ4KMP7 808 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 TM4SF20Q53R12 229 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 CCSAPQ6IQ19 270 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 MPZL3Q6UWV2 235 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 SCUBE1Q8IWY4 988 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 NINJ1Q92982 152 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 CAPNS2Q96L46 248 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 C8orf48Q96LL4 319 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 NEUROD6Q96NK8 337 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 CDC6Q99741 560 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 TMX1Q9H3N1 280 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 GPRC5CQ9NQ84 441 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 IMPACTQ9P2X3 320 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 ANAPC4Q9UJX5 808 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 PLAAQ9Y263 795 aa6.08□□□□□ -1.44
ECHDC1-204ENST00000368292 TRIOBPQ9H2D6 2365 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 ARNTLO00327 626 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 PLD2O14939 933 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 TBC1D8O95759 1140 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 FGAP02671 866 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 THBDP07204 575 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 PRKCAP17252 672 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 SEPHS1P49903 392 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 MTA1Q13330 715 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 CC2D1BQ5T0F9 858 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 CYP4F22Q6NT55 531 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 NSMFQ6X4W1 530 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 IRF2BP1Q8IU81 584 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 RUNDC1Q96C34 613 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 DIRC2Q96SL1 478 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 PCGF6Q9BYE7 350 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 SLC6A17Q9H1V8 727 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 IFT122Q9HBG6 1241 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 CASS4Q9NQ75 786 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 ABCF2Q9UG63 623 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 PUF60Q9UHX1 559 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 SYNPO2Q9UMS6 1093 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 TAF6LQ9Y6J9 622 aa6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-204ENST00000368292 PALLDQ8WX93 1383 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms