RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FMR1Q06787 632 aaKnown RBP eCLIP17.21■□□□□ 0.354e-7■■□□□ 14.1
PTPN11-201ENST00000351677 SLFN12LQ6IEE8 588 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 CCHCR1Q8TD31 782 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 KLHL29Q96CT2 875 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ADAM22Q9P0K1 906 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ANO9A1A5B4 782 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ZNF18P17022 549 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 TERF2Q15554 542 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 C12orf60Q5U649 245 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ADAM21Q9UKJ8 722 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
PTPN11-201ENST00000351677 WDR24Q96S15 920 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 PLA2G12BQ9BX93 195 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 LRRC4Q9HBW1 653 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 FEM1BQ9UK73 627 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 HNRNPH2P55795 449 aaKnown RBP17.21■□□□□ 0.35
PTPN11-201ENST00000351677 GLE1Q53GS7 698 aaKnown RBP17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.35
PTPN11-201ENST00000351677 PODNQ7Z5L7 613 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 GINM1Q9NU53 330 aa17.21■□□□□ 0.35
PTPN11-201ENST00000351677 GPC5P78333 572 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 IRX4P78413 519 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 CEP120Q8N960 986 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 NEDD1Q8NHV4 660 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 SEPT6Q14141 434 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 C6orf118Q5T5N4 469 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 SENP2Q9HC62 589 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
PTPN11-201ENST00000351677 DRAP1Q14919 205 aaPredicted RBP17.2■□□□□ 0.34
PTPN11-201ENST00000351677 PYROXD1Q8WU10 500 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 NPHP3-ACAD11A0A0J9YXS1 232 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 GPC4O75487 556 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 IQCB1Q15051 598 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 GUF1Q8N442 669 aaKnown RBP17.2■□□□□ 0.34
PTPN11-201ENST00000351677 PTPRMP28827 1452 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 WDR64B1ANS9 1081 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 TOM1L1O75674 476 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 SCINQ9Y6U3 715 aa17.2■□□□□ 0.34
PTPN11-201ENST00000351677 SURF1Q15526 300 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 PHF20Q9BVI0 1012 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 WDR70Q9NW82 654 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 IPO11Q9UI26 975 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 MRFAP1Q9Y605 127 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 CPS1P31327 1500 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 DENND3A2RUS2 1198 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 VAMP7P51809 220 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 ADCY2Q08462 1091 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 NFIXQ14938 502 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 RBBP5Q15291 538 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SLC27A3Q5K4L6 730 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 IRX2Q9BZI1 471 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 CA4P22748 312 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 ANTXR2P58335 489 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 MAP7Q14244 749 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 DBN1Q16643 649 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SNRNP48Q6IEG0 339 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 TMEM270Q6UE05 265 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 EIF2AK1Q9BQI3 630 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 INTS2Q9H0H0 1204 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 FAM49AQ9H0Q0 323 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 A0A087WUV0 522 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 METTL23Q86XA0 190 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 ZCCHC17Q9NP64 241 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SAYSD1Q9NPB0 183 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 CLDN3O15551 220 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SLC4A1P02730 911 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 SRGAP2BP0DMP2 458 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 ORC2Q13416 577 aaPredicted RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 CENPUQ71F23 418 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 NGRNQ9NPE2 291 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 PPRC1Q5VV67 1664 aaKnown RBP17.19■□□□□ 0.34
PTPN11-201ENST00000351677 CAMSAP1Q5T5Y3 1602 aa17.19■□□□□ 0.34
PTPN11-201ENST00000351677 PODXLO00592 558 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 ZBED1O96006 694 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 TRIM49P0CI25 452 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 TRIM49CP0CI26 452 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 HDLBPQ00341 1268 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 KIF22Q14807 665 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 RSPH3Q86UC2 560 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 SIX6OS1Q8N1H7 587 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 SAAL1Q96ER3 474 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 DIS3Q9Y2L1 958 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 LDHAP00338 332 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 JADE1Q6IE81 842 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 LXNQ9BS40 222 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 DDX47Q9H0S4 455 aaKnown RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 FIS1Q9Y3D6 152 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 PLEKHG2Q9H7P9 1386 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 SKA2Q8WVK7 121 aaPredicted RBP17.18■□□□□ 0.34
PTPN11-201ENST00000351677 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 ZNF667Q5HYK9 610 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 NUGGCQ68CJ6 796 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 TRIM42Q8IWZ5 723 aa17.18■□□□□ 0.34
PTPN11-201ENST00000351677 ELAC2Q9BQ52 826 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms