RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HERC6Q8IVU3 1022 aa21.45■■□□□ 1.02
SYNE4-202ENST00000340477 FTHL17Q9BXU8 183 aa21.45■■□□□ 1.02
SYNE4-202ENST00000340477 PBX4Q9BYU1 374 aa21.45■■□□□ 1.02
SYNE4-202ENST00000340477 TUFT1Q9NNX1 390 aa21.45■■□□□ 1.02
SYNE4-202ENST00000340477 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.45■■□□□ 1.02
SYNE4-202ENST00000340477 PCDHA11Q9Y5I1 949 aa21.45■■□□□ 1.02
SYNE4-202ENST00000340477 GAS2O43903 313 aaKnown RBP21.44■■□□□ 1.02
SYNE4-202ENST00000340477 SLITRK3O94933 977 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 STBD1O95210 358 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 LYPLA2O95372 231 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 BMP15O95972 392 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 VTNP04004 478 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 PRPHP41219 470 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 CRYBB1P53674 252 aaPredicted RBP21.44■■□□□ 1.02
SYNE4-202ENST00000340477 KIZQ2M2Z5 673 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 DTHD1Q6ZMT9 781 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 PPP1R16BQ96T49 567 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 HSD17B14Q9BPX1 270 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 LRWD1Q9UFC0 647 aa21.44■■□□□ 1.02
SYNE4-202ENST00000340477 MAFO75444 373 aaPredicted RBP21.43■■□□□ 1.02
SYNE4-202ENST00000340477 RPS6KA5O75582 802 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 SYT1P21579 422 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 CD52P31358 61 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 FERMT3Q86UX7 667 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 MYOCDQ8IZQ8 938 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 LINC01465Q8N7H1 131 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 NLRP7Q8WX94 980 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 OSMRQ99650 979 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 SH2D3AQ9BRG2 576 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 POLR3CQ9BUI4 534 aaPredicted RBP21.43■■□□□ 1.02
SYNE4-202ENST00000340477 SLC28A3Q9HAS3 691 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 ANKEF1Q9NU02 776 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 WRAP73Q9P2S5 460 aaPredicted RBP21.43■■□□□ 1.02
SYNE4-202ENST00000340477 PTPRSQ13332 1948 aa21.43■■□□□ 1.02
SYNE4-202ENST00000340477 TLL1O43897 1013 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 PBX2P40425 430 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 RABGGTBP53611 331 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 NPEPPSP55786 919 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 NLRP11P59045 1033 aaKnown RBP21.42■■□□□ 1.02
SYNE4-202ENST00000340477 DEFB103AP81534 67 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 TCTN1Q2MV58 587 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 C4orf32Q8N8J7 132 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 TCP11Q8WWU5 503 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 PADI3Q9ULW8 664 aa21.42■■□□□ 1.02
SYNE4-202ENST00000340477 IGKV6-21A0A0C4DH24 114 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 GPR182O15218 404 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 PDIA4P13667 645 aaKnown RBP21.41■■□□□ 1.02
SYNE4-202ENST00000340477 MUTP22033 750 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 RPA1P27694 616 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 CCT6AP40227 531 aaKnown RBP21.41■■□□□ 1.02
SYNE4-202ENST00000340477 ATP2C1P98194 919 aaPredicted RBP21.41■■□□□ 1.02
SYNE4-202ENST00000340477 NFX1Q12986 1120 aaKnown RBP21.41■■□□□ 1.02
SYNE4-202ENST00000340477 PDIA5Q14554 519 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 EMC2Q15006 297 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 NACC1Q96RE7 527 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 MTRQ99707 1265 aa21.41■■□□□ 1.02
SYNE4-202ENST00000340477 SUCLA2Q9P2R7 463 aaPredicted RBP21.41■■□□□ 1.02
SYNE4-202ENST00000340477 STX6O43752 255 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 GPR32O75388 356 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 GJB5O95377 273 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 XRCC6P12956 609 aaKnown RBP eCLIP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 GPC3P51654 580 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 KRT79Q5XKE5 535 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 PPP2R2DQ66LE6 453 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 FAM117BQ6P1L5 589 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 Q7L0L9 218 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 CATSPER3Q86XQ3 398 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 RHPN2Q8IUC4 686 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 SNX29Q8TEQ0 813 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 PSPC1Q8WXF1 523 aaKnown RBP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 FAM161BQ96MY7 647 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 GCOM2Q9BZD3 368 aaPredicted RBP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 OSBPL7Q9BZF2 842 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 NKX2-4Q9H2Z4 354 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 DHX33Q9H6R0 707 aaKnown RBP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 AGO3Q9H9G7 860 aaKnown RBP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 ATP6V0A4Q9HBG4 840 aa21.4■■□□□ 1.02
SYNE4-202ENST00000340477 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
SYNE4-202ENST00000340477 MED24O75448 989 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 DGAT1O75907 488 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 ARL6IP4Q66PJ3 421 aaKnown RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 ZNF410Q86VK4 478 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 IGSF22Q8N9C0 903 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 CEP89Q96ST8 783 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 INO80BQ9C086 356 aaPredicted RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 ZSCAN16Q9H4T2 348 aaPredicted RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 ZNF576Q9H609 170 aa21.39■■□□□ 1.01
SYNE4-202ENST00000340477 BMP2KQ9NSY1 1161 aaPredicted RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 NOC2LQ9Y3T9 749 aaKnown RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 LAMA2P24043 3122 aaKnown RBP21.39■■□□□ 1.01
SYNE4-202ENST00000340477 DENND3A2RUS2 1198 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 SPATA31C1P0DKV0 1188 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 EIF4BP23588 611 aaKnown RBP21.38■■□□□ 1.01
SYNE4-202ENST00000340477 POTEGQ6S5H5 508 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 PIGOQ8TEQ8 1089 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 NLRP4Q96MN2 994 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 RAD9AQ99638 391 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 ADAMTS10Q9H324 1103 aa21.38■■□□□ 1.01
SYNE4-202ENST00000340477 SEMA6BQ9H3T3 888 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms