RNA–Protein interactions for RNA: ENST00000336128.11

ZNF548-201, Transcript of zinc finger protein 548, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZNF548, Length 2,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-201ENST00000336128 EDNRBP24530 442 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.22
ZNF548-201ENST00000336128 COPB2P35606 906 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 CASP4P49662 377 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 SNAPC2Q13487 334 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 MAP1SQ66K74 1059 aaPredicted RBP13.68□□□□□ -0.22
ZNF548-201ENST00000336128 ANO5Q75V66 913 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 DRC1Q96MC2 740 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 LSM14BQ9BX40 385 aaKnown RBP13.68□□□□□ -0.22
ZNF548-201ENST00000336128 ZNF408Q9H9D4 720 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 DNAI1Q9UI46 699 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 ARID2Q68CP9 1835 aa13.68□□□□□ -0.22
ZNF548-201ENST00000336128 SUPT20HL2P0C7V6 817 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 SP2Q02086 613 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 PPP2R3AQ06190 1150 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 ALCAMQ13740 583 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 SWSAP1Q6NVH7 229 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 MIS18BP1Q6P0N0 1132 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 ABHD15Q6UXT9 468 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZNF548-201ENST00000336128 HS2ST1Q7LGA3 356 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 SLC10A4Q96EP9 437 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 GBP3Q9H0R5 595 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 METTL14Q9HCE5 456 aaKnown RBP13.67□□□□□ -0.22
ZNF548-201ENST00000336128 GPRC5CQ9NQ84 441 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 AGPAT3Q9NRZ7 376 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 A0A0U1RQJ8 604 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 NDUFA10O95299 355 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 KCNH2Q12809 1159 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 OTUD6AQ7L8S5 288 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 CCDC60Q8IWA6 550 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-201ENST00000336128 ATRIPQ8WXE1 791 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 EDEM3Q9BZQ6 932 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 EPN1Q9Y6I3 576 aaPredicted RBP13.67□□□□□ -0.22
ZNF548-201ENST00000336128 WDR81Q562E7 1941 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 IGSF9BQ9UPX0 1349 aa13.67□□□□□ -0.22
ZNF548-201ENST00000336128 AFPP02771 609 aaKnown RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 HNRNPH3P31942 346 aaKnown RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CDK17Q00537 523 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 PRKCEQ02156 737 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 Q3C1V9 767 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 FAM102BQ5T8I3 360 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 PDXDC1Q6P996 788 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CYFIP1Q7L576 1253 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 FAM186BQ8IYM0 893 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 SYCP3Q8IZU3 236 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 GOLGA5Q8TBA6 731 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 BAP1Q92560 729 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 DMAC2Q9NW81 257 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 REXO2Q9Y3B8 237 aaKnown RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 DYNC1I1O14576 645 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 XRCC5P13010 732 aaKnown RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 PSMC2P35998 433 aaKnown RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CYP2J2P51589 502 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 GNG11P61952 73 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 BORCS6Q96GS4 357 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 ACCSQ96QU6 501 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 MMP19Q99542 508 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CRACR2AQ9BSW2 395 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 MKNK1Q9BUB5 465 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 CEP72Q9P209 647 aa13.66□□□□□ -0.22
ZNF548-201ENST00000336128 SEPT9Q9UHD8 586 aaPredicted RBP13.66□□□□□ -0.22
ZNF548-201ENST00000336128 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 FANCGO15287 622 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 NOL4O94818 638 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 PGK2P07205 417 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 UBA1P22314 1058 aaKnown RBP13.65□□□□□ -0.22
ZNF548-201ENST00000336128 CYLC1P35663 651 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-201ENST00000336128 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 PEX3P56589 373 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 FGD4Q96M96 766 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 ST6GALNAC4Q9H4F1 302 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 TMEM206Q9H813 350 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 NHEJ1Q9H9Q4 299 aaPredicted RBP13.65□□□□□ -0.22
ZNF548-201ENST00000336128 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
ZNF548-201ENST00000336128 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 SLC16A4O15374 487 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 ATG7O95352 703 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 ARHGAP25P42331 645 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 GTF2BQ00403 316 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 TCERG1LQ5VWI1 586 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 HAUS6Q7Z4H7 955 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 SLC35C1Q96A29 364 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 WDR24Q96S15 920 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 ZNF302Q9NR11 478 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 PNMA3Q9UL41 463 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 PLAGL2Q9UPG8 496 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 APBA1Q02410 837 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 MYBPC2Q14324 1141 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 KCTD2Q14681 263 aa13.64□□□□□ -0.23
ZNF548-201ENST00000336128 ARHGAP29Q52LW3 1261 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms