RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 JPH2Q9BR39 696 aaPredicted RBP20.9■□□□□ 0.94
CIRBP-201ENST00000320936 TUFT1Q9NNX1 390 aa20.9■□□□□ 0.94
CIRBP-201ENST00000320936 PTPRSQ13332 1948 aa20.9■□□□□ 0.94
CIRBP-201ENST00000320936 ABHD14A-ACY1A0A1B0GW23 586 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 ZBTB39O15060 712 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 EFCAB14O75071 495 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 MED24O75448 989 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 WDR5P61964 334 aaKnown RBP20.89■□□□□ 0.93
CIRBP-201ENST00000320936 SMAD3P84022 425 aaKnown RBP20.89■□□□□ 0.93
CIRBP-201ENST00000320936 PAK2Q13177 524 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 BECN1Q14457 450 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 POTEGQ6S5H5 508 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 ZNF579Q8NAF0 562 aaKnown RBP20.89■□□□□ 0.93
CIRBP-201ENST00000320936 SNX29Q8TEQ0 813 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 PIGOQ8TEQ8 1089 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 APBB2Q92870 758 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 ZNF668Q96K58 619 aaPredicted RBP20.89■□□□□ 0.93
CIRBP-201ENST00000320936 SLC9A7Q96T83 725 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 OSMRQ99650 979 aa20.89■□□□□ 0.93
CIRBP-201ENST00000320936 VWA3AA6NCI4 1184 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 MAFO75444 373 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-201ENST00000320936 BMP15O95972 392 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 CD52P31358 61 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 RFC5P40937 340 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 NLRP11P59045 1033 aaKnown RBP20.88■□□□□ 0.93
CIRBP-201ENST00000320936 CATSPER3Q86XQ3 398 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 EXOC8Q8IYI6 725 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 USP38Q8NB14 1042 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 NLRP7Q8WX94 980 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 POLR3CQ9BUI4 534 aaPredicted RBP20.88■□□□□ 0.93
CIRBP-201ENST00000320936 PPME1Q9Y570 386 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 STK24Q9Y6E0 443 aa20.88■□□□□ 0.93
CIRBP-201ENST00000320936 A0A087WWV3 80 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 PP2D1A8MPX8 630 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 LYPLA2O95372 231 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 SPATA31C1P0DKV0 1188 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 RPA1P27694 616 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 CEBPZQ03701 1054 aaKnown RBP20.87■□□□□ 0.93
CIRBP-201ENST00000320936 DRP2Q13474 957 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 PDIA5Q14554 519 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 EMC2Q15006 297 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 SF3A1Q15459 793 aaKnown RBP20.87■□□□□ 0.93
CIRBP-201ENST00000320936 ZRSR1Q15695 479 aaKnown RBP20.87■□□□□ 0.93
CIRBP-201ENST00000320936 KRT79Q5XKE5 535 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 FAM173BQ6P4H8 233 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 LINC01465Q8N7H1 131 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 IGSF22Q8N9C0 903 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 ZSCAN16Q9H4T2 348 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-201ENST00000320936 ANKEF1Q9NU02 776 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 SUCLA2Q9P2R7 463 aaPredicted RBP20.87■□□□□ 0.93
CIRBP-201ENST00000320936 MSRAQ9UJ68 235 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 KDM3AQ9Y4C1 1321 aa20.87■□□□□ 0.93
CIRBP-201ENST00000320936 RPS6KA5O75582 802 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 AMHP03971 560 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 RABGGTBP53611 331 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 CRYBB1P53674 252 aaPredicted RBP20.86■□□□□ 0.93
CIRBP-201ENST00000320936 DEFB103AP81534 67 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 NFX1Q12986 1120 aaKnown RBP20.86■□□□□ 0.93
CIRBP-201ENST00000320936 IL17AQ16552 155 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 ARL6IP4Q66PJ3 421 aaKnown RBP20.86■□□□□ 0.93
CIRBP-201ENST00000320936 RHPN2Q8IUC4 686 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 MYOCDQ8IZQ8 938 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 NACC1Q96RE7 527 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 CEP89Q96ST8 783 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 ZBED2Q9BTP6 218 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 AGO3Q9H9G7 860 aaKnown RBP20.86■□□□□ 0.93
CIRBP-201ENST00000320936 CDHR5Q9HBB8 845 aa20.86■□□□□ 0.93
CIRBP-201ENST00000320936 USO1O60763 962 aaKnown RBP20.85■□□□□ 0.93
CIRBP-201ENST00000320936 GPR32O75388 356 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 DNAJB2P25686 324 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 PBX2P40425 430 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 GPC3P51654 580 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 RAB30Q15771 203 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 FAM117BQ6P1L5 589 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 TMCO2Q7Z6W1 182 aaPredicted RBP20.85■□□□□ 0.93
CIRBP-201ENST00000320936 ZNF710Q8N1W2 664 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 TMEM143Q96AN5 459 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 NLRP4Q96MN2 994 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 MTRQ99707 1265 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 DHX33Q9H6R0 707 aaKnown RBP20.85■□□□□ 0.93
CIRBP-201ENST00000320936 ATP6V0A4Q9HBG4 840 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 PADI3Q9ULW8 664 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 CLIC4Q9Y696 253 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 SQORQ9Y6N5 450 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 SZT2Q5T011 3432 aa20.85■□□□□ 0.93
CIRBP-201ENST00000320936 IGKV6-21A0A0C4DH24 114 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 ARHGEF35A5YM69 484 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 GAS2O43903 313 aaKnown RBP20.84■□□□□ 0.93
CIRBP-201ENST00000320936 IBSPP21815 317 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-201ENST00000320936 CDC25AP30304 524 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 RARRES1P49788 294 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 MKRN4PQ13434 485 aaPredicted RBP20.84■□□□□ 0.93
CIRBP-201ENST00000320936 ODR4Q5SWX8 454 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 ZNF697Q5TEC3 545 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.84■□□□□ 0.932e-8■□□□□ 8.6
CIRBP-201ENST00000320936 HERC6Q8IVU3 1022 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 PHOSPHO2Q8TCD6 241 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 TMEM40Q8WWA1 233 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 TCP11Q8WWU5 503 aa20.84■□□□□ 0.93
CIRBP-201ENST00000320936 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms