RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 IFT122Q9HBG6 1241 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 PRPSAP1Q14558 356 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 SNCBQ16143 134 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 PDXDC1Q6P996 788 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 EFCC1Q9HA90 598 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 DAGLAQ9Y4D2 1042 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 LDHAP00338 332 aaKnown RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 ARHGEF18Q6ZSZ5 1173 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 HPS3Q969F9 1004 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 NLRP4Q96MN2 994 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 SLC38A10Q9HBR0 1119 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 TUBE1Q9UJT0 475 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 SCINQ9Y6U3 715 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 CPP00450 1065 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 ATP1A1P05023 1023 aaKnown RBP17.61■□□□□ 0.41
BRD3-201ENST00000303407 MUM1Q2TAK8 710 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 WDR24Q96S15 920 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 LXNQ9BS40 222 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
BRD3-201ENST00000303407 IREB2P48200 963 aaKnown RBP17.6■□□□□ 0.41
BRD3-201ENST00000303407 VAMP7P51809 220 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 GPC5P78333 572 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 ARMC9Q7Z3E5 817 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 SUGT1Q9Y2Z0 365 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 TXNDC9O14530 226 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 MYO1EQ12965 1108 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 SNRNP48Q6IEG0 339 aaKnown RBP17.6■□□□□ 0.41
BRD3-201ENST00000303407 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.6■□□□□ 0.413e-9■■■□□ 18.4
BRD3-201ENST00000303407 FAM193BQ96PV7 902 aaPredicted RBP17.6■□□□□ 0.41
BRD3-201ENST00000303407 VCXQ9H320 206 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 MTMR4Q9NYA4 1195 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 P4HBP07237 508 aaKnown RBP17.6■□□□□ 0.41
BRD3-201ENST00000303407 ACTN1P12814 892 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 ZWILCHQ9H900 591 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 SYNGAP1Q96PV0 1343 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 GGCXP38435 758 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 EFCAB13Q8IY85 973 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 GDAP1Q8TB36 358 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 CCSER1Q9C0I3 900 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 PIM2Q9P1W9 311 aa17.6■□□□□ 0.41
BRD3-201ENST00000303407 CNOT8Q9UFF9 292 aaKnown RBP17.6■□□□□ 0.41
BRD3-201ENST00000303407 STXBP3O00186 592 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 PDIA5Q14554 519 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 RC3H1Q5TC82 1133 aaKnown RBP17.59■□□□□ 0.41
BRD3-201ENST00000303407 E4F1Q66K89 784 aaPredicted RBP17.59■□□□□ 0.41
BRD3-201ENST00000303407 FAM149B1Q96BN6 582 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 FAM213AQ9BRX8 229 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 TRIM9Q9C026 710 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 ANAPC7Q9UJX3 599 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 SPATA31D1Q6ZQQ2 1576 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 PRPSAP2O60256 369 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 KRT76Q01546 638 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 STXBP2Q15833 593 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 CCDC38Q502W7 563 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 ERICH1Q86X53 443 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 C7orf31Q8N865 590 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 VWDEQ8N2E2 1590 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 DRAP1Q14919 205 aaPredicted RBP17.59■□□□□ 0.41
BRD3-201ENST00000303407 MCPH1Q8NEM0 835 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 TCP11Q8WWU5 503 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 KCNB2Q92953 911 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 DNAJC17Q9NVM6 304 aaKnown RBP17.59■□□□□ 0.41
BRD3-201ENST00000303407 CNTNAP5Q8WYK1 1306 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 GRID2IPA4D2P6 1211 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
BRD3-201ENST00000303407 SEL1LQ9UBV2 794 aa17.59■□□□□ 0.41
BRD3-201ENST00000303407 HIP1RO75146 1068 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 ITPK1Q13572 414 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 TERF2Q15554 542 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 ADSSL1Q8N142 457 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 KAZALD1Q96I82 304 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 AP5M1Q9H0R1 490 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 MIF4GDA9UHW6 222 aaKnown RBP17.58■□□□□ 0.41
BRD3-201ENST00000303407 QARSP47897 775 aaKnown RBP17.58■□□□□ 0.41
BRD3-201ENST00000303407 HSPH1Q92598 858 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 CFAP36Q96G28 342 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 NUB1Q9Y5A7 615 aa17.58■□□□□ 0.41
BRD3-201ENST00000303407 EXOC1LA0A1B0GW35 172 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 DENND3A2RUS2 1198 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 PODXLO00592 558 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 SLC8A1P32418 973 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 PDE1BQ01064 536 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 NR1I3Q14994 352 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 Q3C1V9 767 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 CALR3Q96L12 384 aaKnown RBP17.58■□□□□ 0.4
BRD3-201ENST00000303407 C7orf25Q9BPX7 421 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
BRD3-201ENST00000303407 PLS3P13797 630 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 PSMA2P25787 234 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 ECE1P42892 770 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 ADCY2Q08462 1091 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 PASD1Q8IV76 773 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 CCNYQ8ND76 341 aa17.58■□□□□ 0.4
BRD3-201ENST00000303407 PACSIN2Q9UNF0 486 aaPredicted RBP17.58■□□□□ 0.4
BRD3-201ENST00000303407 ZHX2Q9Y6X8 837 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms