RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 DAPK3O43293 454 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 SLC25A27O95847 323 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 CYP21A2P08686 494 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 MAPK4P31152 587 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 E2F5Q15329 346 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 SH3D19Q5HYK7 790 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 TBC1D10CQ8IV04 446 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 RSAD2Q8WXG1 361 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 ATF2P15336 505 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 CD19P15391 556 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 VCAM1P19320 739 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 SESN3P58005 492 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 SLMAPQ14BN4 828 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 DBN1Q16643 649 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 ICE2Q659A1 982 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 DPP9Q86TI2 863 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 ANKRD13CQ8N6S4 541 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 CPA4Q9UI42 421 aa12.82□□□□□ -0.36
SYNGAP1-201ENST00000293748 hCG_1642624A0A1W2PR95 340 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SMCO2A6NFE2 343 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 ENC1O14682 589 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 DDAH1O94760 285 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 GNRH1P01148 92 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 RPSAP08865 295 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 TRAPPC10P48553 1259 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 UBXN2AP68543 259 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 FAM26FQ5R3K3 315 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 TTC19Q6DKK2 380 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SARM1Q6SZW1 724 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 GPBP1Q86WP2 473 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 WHAMMQ8TF30 809 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 EPB41L5Q9HCM4 733 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 RAB20Q9NX57 234 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 MYPNQ86TC9 1320 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 GPR25O00155 361 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 IFNAR2P48551 515 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 EMBQ6PCB8 327 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 PANX2Q96RD6 677 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 ASCC2Q9H1I8 757 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 FOXP1Q9H334 677 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 STMN1P16949 149 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 HERVK_113P62684 666 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 PKD2L1Q9P0L9 805 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 DAAM1Q9Y4D1 1078 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 NDUFB10O96000 172 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SCG2P13521 617 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 PPM1FP49593 454 aaPredicted RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SLC12A2P55011 1212 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 YWHAEP62258 255 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SP4Q02446 784 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 RBL2Q08999 1139 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 ADCK5Q3MIX3 580 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 ANKRD35Q8N283 1001 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 LINC00301Q8NCQ3 95 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 NSUN7Q8NE18 718 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 GMCL1P1Q8NEA9 526 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 CNOT6LQ96LI5 555 aaKnown RBP12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 TMEM47Q9BQJ4 181 aa12.81□□□□□ -0.36
SYNGAP1-201ENST00000293748 PGRMC1O00264 195 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 LMNB2Q03252 620 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 NNTQ13423 1086 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 TKFCQ3LXA3 575 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 SYDE2Q5VT97 1194 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 VTI1AQ96AJ9 217 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 JPH2Q9BR39 696 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 PFDN1O60925 122 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 PTGDRQ13258 359 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 UHMK1Q8TAS1 419 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 TRIM17Q9Y577 477 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 SH3BP5O60239 455 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 MGEA5O60502 916 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 TLR2O60603 784 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 SKIP12755 728 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 NR1D1P20393 614 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 VPS41P49754 854 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 ARHGEF18Q6ZSZ5 1173 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 NEK8Q86SG6 692 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 TADA2BQ86TJ2 420 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 CCHCR1Q8TD31 782 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 HVCN1Q96D96 273 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 DNAJC18Q9H819 358 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 ZSWIM5Q9P217 1185 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 ADAM21Q9UKJ8 722 aa12.8□□□□□ -0.36
SYNGAP1-201ENST00000293748 HMGB1P1B2RPK0 211 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 CHUKO15111 745 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 SART1O43290 800 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 EIF3BP55884 814 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 PKN2Q16513 984 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 MAGOHBQ96A72 148 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 TUBB6Q9BUF5 446 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
SYNGAP1-201ENST00000293748 TXLNGQ9NUQ3 528 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 196.6 ms