RNA–Protein interactions for RNA: ENST00000227266.9

CTSC-201, Transcript of cathepsin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSC, Length 1,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-201ENST00000227266 GIT2Q14161 759 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 EMC2Q15006 297 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 TARBP2Q15633 366 aaKnown RBP12.34□□□□□ -0.43
CTSC-201ENST00000227266 ZNF484Q5JVG2 852 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 C7orf31Q8N865 590 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 DNAJC19Q96DA6 116 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 ZBTB10Q96DT7 871 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 MCOLN1Q9GZU1 580 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 ATP6V0A4Q9HBG4 840 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 SETD4Q9NVD3 440 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 KCND2Q9NZV8 630 aa12.34□□□□□ -0.43
CTSC-201ENST00000227266 RSPH10B2B2RC85 870 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 KBTBD13C9JR72 458 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 HAS3O00219 553 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 HIP1RO75146 1068 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 RSPH10BP0C881 870 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 GUCY2CP25092 1073 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 RFC5P40937 340 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 SOX10P56693 466 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 GRIK4Q16099 956 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 NBPF20Q3BBV1 942 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 ISM2Q6H9L7 571 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 CEP89Q96ST8 783 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 SUGCTQ9HAC7 445 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 GPRC5CQ9NQ84 441 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 SFI1A8K8P3 1242 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 TFRCP02786 760 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 FAM47CQ5HY64 1035 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 RBM43Q6ZSC3 357 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 METTL13Q8N6R0 699 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 U2AF1L4Q8WU68 220 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 TMEM143Q96AN5 459 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 TSEN34Q9BSV6 310 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 DHX33Q9H6R0 707 aaKnown RBP12.33□□□□□ -0.44
CTSC-201ENST00000227266 XPNPEP1Q9NQW7 623 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 EXOC1Q9NV70 894 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 PANK4Q9NVE7 773 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 HDAC6Q9UBN7 1215 aa12.33□□□□□ -0.44
CTSC-201ENST00000227266 NRCAMQ92823 1304 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 KLRC4O43908 158 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 MAFO75444 373 aaPredicted RBP12.32□□□□□ -0.44
CTSC-201ENST00000227266 CABYRO75952 493 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 FAM13AO94988 1023 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 GJB1P08034 283 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 KLRC1P26715 233 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 KMT5BQ4FZB7 885 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 CNNM4Q6P4Q7 775 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 SASS6Q6UVJ0 657 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 UNC13DQ70J99 1090 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 CCDC65Q8IXS2 484 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 LRRC71Q8N4P6 559 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 MCPH1Q8NEM0 835 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 CCDC47Q96A33 483 aaKnown RBP12.32□□□□□ -0.44
CTSC-201ENST00000227266 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 GSDMAQ96QA5 445 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 TUBE1Q9UJT0 475 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 MAN1B1Q9UKM7 699 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 DNAH12Q6ZR08 3092 aa12.32□□□□□ -0.44
CTSC-201ENST00000227266 COL1A2P08123 1366 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 PVALEFA0A1B0GWK0 134 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 A0A1W2PQ45 241 aaPredicted RBP12.31□□□□□ -0.44
CTSC-201ENST00000227266 A0A1W2PQY0 241 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 C17orf102A2RUQ5 167 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 RRN3P2A6NIE6 340 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 ESPNB1AK53 854 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 DNM1LO00429 736 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 SGPL1O95470 568 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 C22orf31O95567 290 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
CTSC-201ENST00000227266 COASYQ13057 564 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
CTSC-201ENST00000227266 NT5DC1Q5TFE4 455 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 MTHFD1LQ6UB35 978 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 DAW1Q8N136 415 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 MYCT1Q8N699 235 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 HPS3Q969F9 1004 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 DRC1Q96MC2 740 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 POLR3FQ9H1D9 316 aaPredicted RBP12.31□□□□□ -0.44
CTSC-201ENST00000227266 TSPY26PQ9H489 355 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 TBC1D7Q9P0N9 293 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 ODF2LQ9ULJ1 636 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 COL4A3BPQ9Y5P4 624 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 ZNF200P98182 395 aaPredicted RBP12.31□□□□□ -0.44
CTSC-201ENST00000227266 MAPK7Q13164 816 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 DRP2Q13474 957 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 MARCH8Q5T0T0 291 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 EFCAB12Q6NXP0 572 aa12.31□□□□□ -0.44
CTSC-201ENST00000227266 NFRKBQ6P4R8 1299 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms