RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Adgre1Q61549 931 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 GartQ64737 1010 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Asic3Q6X1Y6 530 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 Sulf1Q8K007 870 aa17.38■□□□□ 0.37
Trim39-203ENSMUST00000113706 SpibO35906 267 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Akap2O54931 893 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tp53P02340 387 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Kcna2P63141 499 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Slc10a4Q3UEZ8 437 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ccdc42Q5SV66 316 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Irak1Q62406 710 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Rpf2Q9JJ80 306 aaKnown RBP17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ttll6A4Q9E8 822 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Cdr2P97817 455 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Abhd15Q5F2F2 459 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Atp13a4Q5XF90 1193 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Hdac10Q6P3E7 666 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Actn1Q7TPR4 892 aaKnown RBP17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Map3k11Q80XI6 850 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Hpcal4Q8BGZ1 191 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 EtnpplQ8BWU8 499 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 1700020D05RikQ99PB1 294 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Erp44Q9D1Q6 406 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Slfn14V9GXG1 899 aa17.37■□□□□ 0.37
Trim39-203ENSMUST00000113706 Actn4P57780 912 aaKnown RBP17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Znhit6Q3UFB2 460 aaKnown RBP17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Dhx32Q8BZS9 744 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Rassf4Q8CB96 322 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ubxn2aQ99KJ0 258 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 A0A286YCQ6 122 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Fam129cD3YZB0 591 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Snx12O70493 165 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Eif3j1Q3UGC7 261 aaKnown RBP17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Pls3Q99K51 630 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 AdarQ99MU3 1178 aaKnown RBP17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Usp26Q99MX1 835 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ngly1Q9JI78 651 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tmod4Q9JLH8 345 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Trp53inp1Q9QXE4 239 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Mmp15O54732 657 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 PklrP53657 574 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 NeblQ0II04 452 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 NntQ61941 1086 aaKnown RBP17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Cep70Q6IQY5 616 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 EpgnQ924X1 152 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Card14Q99KF0 999 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Sar1bQ9CQC9 198 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Mzb1Q9D8I1 188 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 ThegQ9JMB1 375 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 S1pr4Q9Z0L1 386 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Eif2ak3Q9Z2B5 1114 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Disp2Q8CIP5 1345 aa17.36■□□□□ 0.37
Trim39-203ENSMUST00000113706 Epc1Q8C9X6 813 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Vcpip1Q8CDG3 1220 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Scyl2Q8CFE4 930 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ero1bQ8R2E9 467 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Znf445Q8R2V3 986 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Reep2Q8VCD6 254 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 FibpQ9JI19 357 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Syt2P46097 422 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Vsnl1P62761 191 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 NogP97466 232 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Adgra1Q8C4G9 578 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Vps52Q8C754 723 aaKnown RBP17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Mov10l1Q99MV5 1187 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Snx10Q9CWT3 201 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Prl2b1Q9DAZ2 228 aa17.35■□□□□ 0.37
Trim39-203ENSMUST00000113706 Cbx2P30658 519 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Spdye4aQ5IBH6 268 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Xpnpep1Q6P1B1 623 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ipo5Q8BKC5 1097 aaKnown RBP17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Hsdl1Q8BTX9 330 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Btbd7Q8CFE5 1130 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Cd2bp2Q9CWK3 342 aaKnown RBP17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Gm8298J3QPI0 401 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Cyth3O08967 399 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Per1O35973 1291 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Kcnk18Q6VV64 394 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Myh9Q8VDD5 1960 aaKnown RBP17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Pcdhgc5Q91XW9 944 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Sucla2Q9Z2I9 463 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 1700016G14RikA0A286YCZ6 238 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Actr2P61161 394 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Tarbp2P97473 365 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Ccpg1Q640L3 753 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Mrpl58Q8R035 206 aa17.34■□□□□ 0.37
Trim39-203ENSMUST00000113706 Gm3409A0A0G2JE67 319 aa17.33■□□□□ 0.37
Trim39-203ENSMUST00000113706 Col9a2Q07643 688 aa17.33■□□□□ 0.37
Trim39-203ENSMUST00000113706 Gimap9G3X987 291 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Enc1O35709 589 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Cd70O55237 195 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Senp1P59110 640 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Dusp4Q8BFV3 398 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Fam111aQ9D2L9 613 aa17.33■□□□□ 0.36
Trim39-203ENSMUST00000113706 Sema4dO09126 861 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Dpcr1Q3TNW5 500 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 ItgadQ3V0T4 1168 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Rnf207Q3V3A7 635 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Nol7Q9D7Z3 254 aaKnown RBP17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Zgrf1Q0VGT4 1863 aa17.32■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms