RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Tmc4Q7TQ65 694 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Nxf7Q80SZ6 620 aaKnown RBP8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Cep55Q8BT07 462 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Pwp2Q8BU03 919 aaKnown RBP8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ift57Q8BXG3 429 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Kbtbd13Q8C828 458 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 GptQ8QZR5 496 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Plppr2Q8VCY8 343 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Slc8b1Q925Q3 585 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Aldh1b1Q9CZS1 519 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ccdc47Q9D024 483 aaKnown RBP8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ccdc94Q9D6J3 314 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Actrt2Q9D9L5 377 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Pus3Q9JI38 481 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 AuhQ9JLZ3 314 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Dctpp1Q9QY93 170 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Syt10Q9R0N4 523 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Slfn1Q9Z0I7 337 aa8.11□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Kntc1Q8C3Y4 2207 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Adh6bA0A1D5RMB0 384 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Kansl3A2RSY1 903 aaKnown RBP8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Gm3250E9Q1M3 230 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Itga10E9Q6R1 1167 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Lnx1O70263 728 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Cops6O88545 324 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Fgl2P12804 432 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Mmp12P34960 473 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Anks1aP59672 1150 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Sptlc2P97363 560 aaKnown RBP8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ckap2Q3V1H1 664 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Sh2d1b2Q45HK4 132 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Prdm1Q60636 856 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ppp2r5eQ61151 467 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Lrrc8aQ80WG5 810 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Trnp1Q80ZI1 223 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Slitrk5Q810B7 957 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 U2af1l4Q8BGJ9 220 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Phc3Q8CHP6 981 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Rassf8Q8CJ96 419 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Evc2Q8K1G2 1220 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Taf6lQ8R2K4 616 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ptcd2Q8R3K3 381 aaKnown RBP8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 CutaQ9CQ89 177 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Filip1Q9CS72 1211 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Raver1Q9CW46 748 aaKnown RBP8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 CpvlQ9D3S9 478 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 B3galt4Q9Z0F0 371 aa8.1□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Pcdhb9E9Q5G2 828 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Prkg1P0C605 671 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 L1camP11627 1260 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 CebpzP53569 1052 aaKnown RBP8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Cct2P80314 535 aaKnown RBP8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 RhodP97348 210 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Rab33aP97950 237 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Fscn2Q32M02 492 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 VeztQ3ZK22 780 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ddx49Q4FZF3 480 aaKnown RBP8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Senp5Q6NXL6 749 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Sez6lQ6P1D5 963 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Ppp2r5bQ6PD28 497 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Dhx40Q6PE54 779 aaKnown RBP8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Tmem59lQ7TNI2 337 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 CyldQ80TQ2 952 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Slu7Q8BHJ9 585 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Zkscan8Q8BSL0 588 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Prkd2Q8BZ03 875 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Otud6bQ8K2H2 294 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Paf1Q8K2T8 535 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Kcnk13Q8R1P5 405 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Rbm42Q91V81 474 aaKnown RBP8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Terf2ipQ91VL8 393 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Glrx3Q9CQM9 337 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Vps33aQ9D2N9 598 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Dusp10Q9ESS0 483 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 DgkeQ9R1C6 564 aa8.09□□□□□ -1.11
Ccdc47-202ENSMUST00000106865 Sycp2lA0A0M3U1B0 842 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Bin2D3Z6Q9 489 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Vmn2r23E9PXI5 849 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Zscan29E9Q5B4 869 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ampd3O08739 766 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Myo1aO88329 1043 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Trim30aP15533 496 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 U2af2P26369 475 aaKnown RBP8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Sept1P42209 366 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Gpr182P43142 395 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Foxp1P58462 705 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Terf1P70371 421 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 PcQ05920 1178 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Atp2b3Q0VF55 1220 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Nlrp9aQ66X03 949 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ddx31Q6NZQ2 687 aaKnown RBP8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slc44a1Q6X893 653 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Sass6Q80UK7 654 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slitrk3Q810B9 980 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Slc39a11Q8BWY7 342 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ccz1Q8C1Y8 480 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Ttc19Q8CC21 365 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Mrpl58Q8R035 206 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Wasf1Q8R5H6 559 aa8.08□□□□□ -1.12
Ccdc47-202ENSMUST00000106865 Nol6Q8R5K4 1152 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms