RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C CPR1P14832 162 aaKnown RBP3.06□□□□□ -1.92
RRP42YDL111C HEM15P16622 393 aa3.06□□□□□ -1.92
RRP42YDL111C UGA1P17649 471 aa3.06□□□□□ -1.92
RRP42YDL111C ARF2P19146 181 aaKnown RBP3.06□□□□□ -1.92
RRP42YDL111C MXR2P25566 168 aa3.06□□□□□ -1.92
RRP42YDL111C ATS1P31386 333 aa3.06□□□□□ -1.92
RRP42YDL111C YPS1P32329 569 aa3.06□□□□□ -1.92
RRP42YDL111C PHA2P32452 334 aa3.06□□□□□ -1.92
RRP42YDL111C MRPS5P33759 307 aa3.06□□□□□ -1.92
RRP42YDL111C TIR2P33890 251 aa3.06□□□□□ -1.92
RRP42YDL111C GPX2P38143 162 aa3.06□□□□□ -1.92
RRP42YDL111C YBR137WP38276 179 aa3.06□□□□□ -1.92
RRP42YDL111C GEP4P38812 185 aa3.06□□□□□ -1.92
RRP42YDL111C PEX18P38855 283 aa3.06□□□□□ -1.92
RRP42YDL111C BTT1P40314 149 aaPredicted RBP3.06□□□□□ -1.92
RRP42YDL111C YJL213WP40896 331 aa3.06□□□□□ -1.92
RRP42YDL111C AIP1P46680 615 aaKnown RBP3.06□□□□□ -1.92
RRP42YDL111C TRM112P53738 135 aaPredicted RBP3.06□□□□□ -1.92
RRP42YDL111C APC4Q04601 652 aa3.06□□□□□ -1.92
RRP42YDL111C ERV41Q04651 352 aa3.06□□□□□ -1.92
RRP42YDL111C YLH47Q06493 454 aa3.06□□□□□ -1.92
RRP42YDL111C MRPL35Q06678 367 aa3.06□□□□□ -1.92
RRP42YDL111C APC5Q08683 685 aa3.06□□□□□ -1.92
RRP42YDL111C YLR108CQ12259 485 aa3.06□□□□□ -1.92
RRP42YDL111C MEX67Q99257 599 aaKnown RBP3.06□□□□□ -1.92
RRP42YDL111C RPL18AP0CX49 186 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C RPL18BP0CX50 186 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C NOP1P15646 327 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C FAR1P21268 830 aa3.05□□□□□ -1.92
RRP42YDL111C MCK1P21965 375 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C CIN8P27895 1000 aa3.05□□□□□ -1.92
RRP42YDL111C RAD5P32849 1169 aaPredicted RBP3.05□□□□□ -1.92
RRP42YDL111C PAD1P33751 242 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
RRP42YDL111C YHR182WP38870 785 aa3.05□□□□□ -1.92
RRP42YDL111C YHR218WP38899 603 aa3.05□□□□□ -1.92
RRP42YDL111C UTP25P40498 721 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C SEC27P41811 889 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C IDP2P41939 412 aa3.05□□□□□ -1.92
RRP42YDL111C YFL067WP43537 175 aa3.05□□□□□ -1.92
RRP42YDL111C PNC1P53184 216 aaKnown RBP3.05□□□□□ -1.92
RRP42YDL111C LST7P53237 242 aa3.05□□□□□ -1.92
RRP42YDL111C COS1P53822 381 aa3.05□□□□□ -1.92
RRP42YDL111C GOR1P53839 350 aa3.05□□□□□ -1.92
RRP42YDL111C ALF1P53904 254 aa3.05□□□□□ -1.92
RRP42YDL111C PRM6Q04705 352 aa3.05□□□□□ -1.92
RRP42YDL111C NAT4Q04751 285 aa3.05□□□□□ -1.92
RRP42YDL111C AHC1Q12433 566 aa3.05□□□□□ -1.92
RRP42YDL111C MRPL23Q12487 163 aaPredicted RBP3.05□□□□□ -1.92
RRP42YDL111C VMA5P31412 392 aaKnown RBP3.04□□□□□ -1.92
RRP42YDL111C ZUO1P32527 433 aaKnown RBP3.04□□□□□ -1.92
RRP42YDL111C BUD2P33314 1104 aa3.04□□□□□ -1.92
RRP42YDL111C PET100P38958 111 aa3.04□□□□□ -1.92
RRP42YDL111C RBG1P39729 369 aa3.04□□□□□ -1.92
RRP42YDL111C KEG1P43614 200 aa3.04□□□□□ -1.92
RRP42YDL111C GCD14P46959 383 aaPredicted RBP3.04□□□□□ -1.92
RRP42YDL111C ABM1P47146 123 aa3.04□□□□□ -1.92
RRP42YDL111C GTO1P48239 356 aa3.04□□□□□ -1.92
RRP42YDL111C CRZ1P53968 678 aa3.04□□□□□ -1.92
RRP42YDL111C RVB1Q03940 463 aaKnown RBP3.04□□□□□ -1.92
RRP42YDL111C RRN11Q04712 507 aa3.04□□□□□ -1.92
RRP42YDL111C ESA1Q08649 445 aa3.04□□□□□ -1.92
RRP42YDL111C HNT3Q08702 217 aa3.04□□□□□ -1.92
RRP42YDL111C PAA1Q12447 191 aaKnown RBP3.04□□□□□ -1.92
RRP42YDL111C PIS1P06197 220 aaKnown RBP3.03□□□□□ -1.92
RRP42YDL111C GDH1P07262 454 aaKnown RBP3.03□□□□□ -1.92
RRP42YDL111C SSA3P09435 649 aaKnown RBP3.03□□□□□ -1.92
RRP42YDL111C DCC1P25559 380 aa3.03□□□□□ -1.92
RRP42YDL111C ERG9P29704 444 aa3.03□□□□□ -1.92
RRP42YDL111C ACB1P31787 87 aa3.03□□□□□ -1.92
RRP42YDL111C SDH3P33421 198 aa3.03□□□□□ -1.92
RRP42YDL111C RPC25P35718 212 aa3.03□□□□□ -1.92
RRP42YDL111C MYO3P36006 1272 aa3.03□□□□□ -1.92
RRP42YDL111C YKL070WP36087 169 aa3.03□□□□□ -1.92
RRP42YDL111C IST2P38250 946 aa3.03□□□□□ -1.92
RRP42YDL111C YHK8P38776 514 aa3.03□□□□□ -1.92
RRP42YDL111C SBE22P38814 852 aa3.03□□□□□ -1.92
RRP42YDL111C SMC2P38989 1170 aaKnown RBP3.03□□□□□ -1.92
RRP42YDL111C YIL029CP40538 142 aa3.03□□□□□ -1.92
RRP42YDL111C INA22P40576 216 aa3.03□□□□□ -1.92
RRP42YDL111C TAF6P53040 516 aa3.03□□□□□ -1.92
RRP42YDL111C HER2Q03557 464 aa3.03□□□□□ -1.92
RRP42YDL111C UBX2Q04228 584 aa3.03□□□□□ -1.92
RRP42YDL111C BUR2Q05949 395 aa3.03□□□□□ -1.92
RRP42YDL111C YTH1Q06102 208 aaPredicted RBP3.03□□□□□ -1.92
RRP42YDL111C KAP95Q06142 861 aaKnown RBP3.03□□□□□ -1.92
RRP42YDL111C SMC5Q08204 1093 aa3.03□□□□□ -1.92
RRP42YDL111C PPT2Q12036 173 aa3.03□□□□□ -1.92
RRP42YDL111C LDB17Q12342 491 aa3.03□□□□□ -1.92
RRP42YDL111C STE2D6VTK4 431 aa3.02□□□□□ -1.93
RRP42YDL111C PHO2P07269 559 aa3.02□□□□□ -1.93
RRP42YDL111C CAR2P07991 424 aaKnown RBP3.02□□□□□ -1.93
RRP42YDL111C UTR1P21373 530 aa3.02□□□□□ -1.93
RRP42YDL111C PRO3P32263 286 aaKnown RBP3.02□□□□□ -1.93
RRP42YDL111C KAR9P32526 644 aa3.02□□□□□ -1.93
RRP42YDL111C YKR015CP36111 568 aa3.02□□□□□ -1.93
RRP42YDL111C SPT8P38915 602 aa3.02□□□□□ -1.93
RRP42YDL111C MAM33P40513 266 aa3.02□□□□□ -1.93
RRP42YDL111C NCA3P46955 337 aa3.02□□□□□ -1.93
RRP42YDL111C TRF5P48561 642 aaKnown RBP3.02□□□□□ -1.93
RRP42YDL111C NAS6P50086 228 aa3.02□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms