RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 GRB10Q13322 594 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 NFKBIBQ15653 356 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 ZNF484Q5JVG2 852 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 HYIQ5T013 277 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 CXCL17Q6UXB2 119 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 SEZ6LQ9BYH1 1024 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 TNMDQ9H2S6 317 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 ATP6V0A4Q9HBG4 840 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 DACT1Q9NYF0 836 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 KCND2Q9NZV8 630 aa14.42□□□□□ -0.1
PHGDH-218ENST00000641491 DBR1Q9UK59 544 aaKnown RBP14.42□□□□□ -0.1
PHGDH-218ENST00000641491 IGKV6D-21A0A0A0MT36 114 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 A0A0U1RQG5 324 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-218ENST00000641491 C17orf102A2RUQ5 167 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 MYADML2A6NDP7 307 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 E9PMD0 336 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 CTAGE5O15320 804 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 USO1O60763 962 aaKnown RBP14.41□□□□□ -0.1
PHGDH-218ENST00000641491 MYL1P05976 194 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 RFC5P40937 340 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 ACLYP53396 1101 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 PLCB4Q15147 1175 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 UGCGQ16739 394 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 USP49Q70CQ1 688 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 ANKLE1Q8NAG6 615 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 MCPH1Q8NEM0 835 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 SCLT1Q96NL6 688 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 MMTAG2Q9BU76 263 aaKnown RBP14.41□□□□□ -0.1
PHGDH-218ENST00000641491 TIPINQ9BVW5 301 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 GOLPH3LQ9H4A5 285 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 ZHX3Q9H4I2 956 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 CYP26B1Q9NR63 512 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 SERTAD1Q9UHV2 236 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 COL1A2P08123 1366 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 NRCAMQ92823 1304 aa14.41□□□□□ -0.1
PHGDH-218ENST00000641491 TLR3O15455 904 aaKnown RBP14.4□□□□□ -0.1
PHGDH-218ENST00000641491 MAGEB2O15479 319 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
PHGDH-218ENST00000641491 NR1I2O75469 434 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 DGAT1O75907 488 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 FAM13AO94988 1023 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 SPATA31C1P0DKV0 1188 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 HOXD8P13378 290 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-218ENST00000641491 AFMP43652 599 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 ASIC1P78348 528 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 MCM6Q14566 821 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 GRIK4Q16099 956 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 PLA2G4FQ68DD2 849 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 LHX8Q68G74 356 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 PADI6Q6TGC4 694 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 KRBA2Q6ZNG9 492 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 RSPH3Q86UC2 560 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 METTL13Q8N6R0 699 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 KLHDC9Q8NEP7 349 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 TCP11Q8WWU5 503 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 DRC1Q96MC2 740 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 TIGD1Q96MW7 591 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 PNMA5Q96PV4 448 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 MTRQ99707 1265 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 OGDHLQ9ULD0 1010 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 HPSEQ9Y251 543 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 CUL9Q8IWT3 2517 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 MROH7Q68CQ1 1323 aa14.4□□□□□ -0.1
PHGDH-218ENST00000641491 FAM237AA0A1B0GTK4 181 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 A0A1W2PQ45 241 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-218ENST00000641491 A0A1W2PQY0 241 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 M0QZ92 97 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 RPLP2P05387 115 aaKnown RBP14.39□□□□□ -0.11
PHGDH-218ENST00000641491 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 IDEP14735 1019 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 LIG1P18858 919 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 GJA8P48165 433 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 NKX3-2P78367 333 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 CCDC183Q5T5S1 534 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 FAM102BQ5T8I3 360 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 FMR1NBQ8N0W7 255 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-218ENST00000641491 SYT2Q8N9I0 419 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-218ENST00000641491 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 PCYT2Q99447 389 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 C16orf70Q9BSU1 422 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 RMND1Q9NWS8 449 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 KCNG1Q9UIX4 513 aa14.39□□□□□ -0.11
PHGDH-218ENST00000641491 RANBP2P49792 3224 aaKnown RBP14.39□□□□□ -0.11
PHGDH-218ENST00000641491 LETM1O95202 739 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-218ENST00000641491 INSRRP14616 1297 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 RARRES1P49788 294 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 PTPN11Q06124 597 aaPredicted RBP14.38□□□□□ -0.11
PHGDH-218ENST00000641491 ITGA7Q13683 1181 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 EMC2Q15006 297 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 POSTNQ15063 836 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 KLHL40Q2TBA0 621 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 NFRKBQ6P4R8 1299 aa14.38□□□□□ -0.11
PHGDH-218ENST00000641491 CCDC155Q8N6L0 562 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms