RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 VPS13AQ96RL7 3174 aa11.19□□□□□ -0.62
PHGDH-212ENST00000641247 NARSO43776 548 aaKnown RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 PCP11498 1178 aaKnown RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 PDE4AP27815 886 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 FAM189BP81408 668 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 RSPO4Q2I0M5 234 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 RARS2Q5T160 578 aaKnown RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 USP17L6PQ6QN14 398 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 MRPL43Q8N983 215 aaKnown RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 CYP2W1Q8TAV3 490 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 SEPT1Q8WYJ6 367 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 CASP10Q92851 521 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 CASD1Q96PB1 797 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 ADAM2Q99965 735 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 SENP2Q9HC62 589 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 ERAP1Q9NZ08 941 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 PKD2L1Q9P0L9 805 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 LZTS1Q9Y250 596 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 PCDHA2Q9Y5H9 948 aa11.18□□□□□ -0.62
PHGDH-212ENST00000641247 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-212ENST00000641247 EP300Q09472 2414 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-212ENST00000641247 CACNA1BQ00975 2339 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 KRBA1A5PL33 1030 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 ZNF213O14771 459 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 STAM2O75886 525 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 EOMESO95936 686 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 ITGB5P18084 799 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 ITIH3Q06033 890 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 PLCB4Q15147 1175 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 SEC23AQ15436 765 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 KCNT2Q6UVM3 1135 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 TMC7Q7Z402 723 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 SIX5Q8N196 739 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 GLG1Q92896 1179 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 NECTIN4Q96NY8 510 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 RNF41Q9H4P4 317 aaPredicted RBP11.17□□□□□ -0.62
PHGDH-212ENST00000641247 NGRNQ9NPE2 291 aaKnown RBP11.17□□□□□ -0.62
PHGDH-212ENST00000641247 RALYQ9UKM9 306 aaKnown RBP11.17□□□□□ -0.62
PHGDH-212ENST00000641247 ST3GAL5Q9UNP4 418 aa11.17□□□□□ -0.62
PHGDH-212ENST00000641247 KDM3AQ9Y4C1 1321 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 EPG5Q9HCE0 2579 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 FSD2A1L4K1 749 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 MEIS2O14770 477 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 EPCAMP16422 314 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 KRT76Q01546 638 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 TPRNQ4KMQ1 711 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 SLC24A5Q71RS6 500 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 CYB5R4Q7L1T6 521 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 TDRD5Q8NAT2 981 aaKnown RBP11.16□□□□□ -0.62
PHGDH-212ENST00000641247 AUTS2Q8WXX7 1259 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 RTP3Q9BQQ7 232 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 SMARCAD1Q9H4L7 1026 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 KCNK12Q9HB15 430 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 CYP26B1Q9NR63 512 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 DBR1Q9UK59 544 aaKnown RBP11.16□□□□□ -0.62
PHGDH-212ENST00000641247 GINS2Q9Y248 185 aa11.16□□□□□ -0.62
PHGDH-212ENST00000641247 SMIM35A0A1B0GVV1 85 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 POTEMA6NI47 508 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 NT5C1B-RDH14C9J2C7 533 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 N4BP1O75113 896 aaKnown RBP11.15□□□□□ -0.62
PHGDH-212ENST00000641247 RPS6KA5O75582 802 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 LAG3P18627 525 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 MTHFRP42898 656 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 ATXN1P54253 815 aaKnown RBP11.15□□□□□ -0.62
PHGDH-212ENST00000641247 NUCB1Q02818 461 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 TDGQ13569 410 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 DSC3Q14574 896 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 CCDC178Q5BJE1 867 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 ATAT1Q5SQI0 421 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 KIAA1841Q6NSI8 718 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 POTEGQ6S5H5 508 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 FAM228AQ86W67 206 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 SUMF1Q8NBK3 374 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 RSAD2Q8WXG1 361 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 PPP1R16BQ96T49 567 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 PUF60Q9UHX1 559 aaKnown RBP11.15□□□□□ -0.62
PHGDH-212ENST00000641247 DUSP12Q9UNI6 340 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 USTQ9Y2C2 406 aa11.15□□□□□ -0.62
PHGDH-212ENST00000641247 MYO10Q9HD67 2058 aa11.15□□□□□ -0.63
PHGDH-212ENST00000641247 ZNF292O60281 2723 aa11.15□□□□□ -0.63
PHGDH-212ENST00000641247 PNMA6FA0A0J9YX94 578 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 CXCL14O95715 111 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 CFHP08603 1231 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 SP9P0CG40 484 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 PDE1AP54750 535 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 GRM4Q14833 912 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
PHGDH-212ENST00000641247 TMC5Q6UXY8 1006 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 NLRX1Q86UT6 975 aa11.14□□□□□ -0.63
PHGDH-212ENST00000641247 TMEM173Q86WV6 379 aaPredicted RBP11.14□□□□□ -0.63
PHGDH-212ENST00000641247 MAML2Q8IZL2 1156 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms